Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 36767987 . G A CCDS13302.1:NM_004613.2:c.1169gCg>gTg_NP_004604.2:p.390A>V Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4pyg 1 P21980 100.0 0.0 X-RAY
 2015-02-11 ALA A:390 A:390 0.0 0.0 H -55.1 -40.6 0.0 0.0 0.0 HOH
 3.857
 N
 O
ALA B:390 B:390 3.0 0.026 H -44.0 -46.3 NA NA NA
ALA C:390 E:390 0.0 0.0 H -53.9 -48.4 NA NA NA
6a8p 1 P21980 100.0 0.0 X-RAY
 2018-09-26 ALA A:390 A:390 1.0 0.009 H -61.9 -39.7 1.0 0.009 0.0
ALA B:390 B:390 0.0 0.0 H -61.8 -38.9 NA NA NA
ALA C:390 C:390 0.0 0.0 H -55.4 -39.9 NA NA NA
6kzb 1 P21980 100.0 0.0 X-RAY
 2020-12-09 ALA A:390 A:390 0.0 0.0 H -67.7 -47.7 0.0 0.0 0.0
ALA B:390 B:390 0.0 0.0 H -66.1 -43.7 NA NA NA
ALA C:390 C:390 0.0 0.0 H -65.5 -44.3 NA NA NA
3s3j 1 P21980 100.0 0.0 X-RAY
 2012-06-06 ALA A:397 A:390 1.0 0.009 H -52.5 -45.9 1.0 0.009 0.0 HOH
 3.109
 N
 O
3s3p 1 P21980 100.0 0.0 X-RAY
 2012-06-06 ALA A:397 A:390 1.0 0.009 H -47.4 -54.0 1.0 0.009 0.0 HOH
 3.472
 N
 O
3s3s 1 P21980 100.0 0.0 X-RAY
 2012-06-06 ALA A:397 A:390 1.0 0.009 H -54.0 -42.8 1.0 0.009 0.0 HOH
 3.291
 N
 O
3ly6 1 P21980 99.85 0.0 X-RAY
 2010-08-18 ALA A:390 A:390 1.0 0.009 H -49.0 -43.7 1.0 0.009 0.0
ALA B:390 B:390 1.0 0.009 H -49.1 -44.1 NA NA NA
ALA C:390 C:390 1.0 0.009 H -49.1 -43.0 NA NA NA
1kv3 1 P21980 99.27 0.0 X-RAY
 2002-03-13 ALA A:390 A:390 0.0 0.0 H -45.7 -47.5 0.0 0.0 0.0 HOH
 3.570
 N
 O
ALA B:390 B:390 0.0 0.0 H -44.4 -46.4 NA NA NA
ALA C:390 C:390 0.0 0.0 H -46.2 -45.8 0.0 0.0 0.0 HOH
 5.099
 N
 O
ALA D:390 D:390 0.0 0.0 H -48.9 -43.8 NA NA NA
ALA E:390 E:390 0.0 0.0 H -47.4 -43.2 NA NA NA
ALA F:390 F:390 0.0 0.0 H -49.4 -43.0 NA NA NA
2q3z 1 P21980 99.27 0.0 X-RAY
 2007-10-23 ALA A:390 A:390 1.0 0.009 H -59.9 -39.8 1.0 0.009 0.0 HOH
 2.826
 N
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21980-f1 1 P21980 100.0 0.0 ALA A:390 A:390 0.0 0.0 H -57.3 -40.6