Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 36768047 . C A CCDS13302.1:NM_004613.2:c.1109tGc>tTc_NP_004604.2:p.370C>F Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4pyg 1 P21980 100.0 0.0 X-RAY
 2015-02-11 CYS A:370 A:370 4.0 0.03 E -77.1 -160.0 4.0 0.03 0.0 HOH
 9.599
 O
 O
CYS B:370 B:370 0.0 0.0 -66.0 156.9 NA NA NA
CYS C:370 E:370 4.0 0.03 -68.3 -175.6 NA NA NA
6a8p 1 P21980 100.0 0.0 X-RAY
 2018-09-26 CYS A:370 A:370 4.0 0.03 E -74.3 161.2 4.0 0.03 0.0
CYS B:370 B:370 16.0 0.119 -77.1 164.9 NA NA NA
CYS C:370 C:370 14.0 0.104 E -74.9 164.1 NA NA NA
6kzb 1 P21980 100.0 0.0 X-RAY
 2020-12-09 CYS A:370 A:370 3.0 0.022 -77.4 140.0 3.0 0.022 0.0
CYS B:370 B:370 10.0 0.074 B -82.2 138.3 NA NA NA
CYS C:370 C:370 9.0 0.067 -76.1 144.9 NA NA NA
3s3j 1 P21980 100.0 0.0 X-RAY
 2012-06-06 CYS A:377 A:370 27.0 0.2 -85.5 160.4 27.0 0.2 0.0 SO4
SO4
HOH
 6.001
9.302
5.829
 CB
SG
SG
 O4
O4
O
3s3p 1 P21980 100.0 0.0 X-RAY
 2012-06-06 CYS A:377 A:370 89.0 0.659 360.0 133.2 89.0 0.659 0.0 SO4
SO4
HOH
 5.341
9.391
5.374
 SG
SG
SG
 O2
O2
O
3s3s 1 P21980 100.0 0.0 X-RAY
 2012-06-06 CYS A:377 A:370 89.0 0.659 360.0 129.7 89.0 0.659 0.0 SO4
SO4
HOH
 5.233
8.822
3.015
 CB
SG
O
 O2
O3
O
3ly6 1 P21980 99.85 0.0 X-RAY
 2010-08-18 CYS A:370 A:370 3.0 0.022 E -103.6 -179.8 3.0 0.022 0.0
CYS B:370 B:370 2.0 0.015 E -103.7 178.9 NA NA NA
CYS C:370 C:370 3.0 0.022 E -102.7 178.8 NA NA NA
1kv3 1 P21980 99.27 0.0 X-RAY
 2002-03-13 CYS A:370 A:370 21.0 0.156 E -76.5 -177.1 21.0 0.156 0.0 HOH
 4.337
 CB
 O
CYS B:370 B:370 7.0 0.052 E -77.2 -177.3 NA NA NA
CYS C:370 C:370 5.0 0.037 E -82.1 -178.1 5.0 0.037 0.0 HOH
 3.568
 C
 O
CYS D:370 D:370 2.0 0.015 E -82.8 -176.8 NA NA NA
CYS E:370 E:370 7.0 0.052 E -88.3 -174.2 NA NA NA
CYS F:370 F:370 21.0 0.156 E -75.0 -177.7 NA NA NA
2q3z 1 P21980 99.27 0.0 X-RAY
 2007-10-23 CYS A:370 A:370 10.0 0.074 -148.6 151.1 10.0 0.074 0.0 SO4
HOH
 7.014
2.997
 N
O
 O2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21980-f1 1 P21980 100.0 0.0 CYS A:370 A:370 10.0 0.074 -142.7 143.9