Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 36769749 | . | G | A | CCDS13302.1:NM_004613.2:c.1034cCg>cTg_NP_004604.2:p.345P>L | Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4pyg | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2015-02-11 | PRO | A:345 | A:345 | 108.0 | 0.745 | T | -84.0 | -5.0 | 108.0 | 0.745 | 0.0 | ||||||
| PRO | B:345 | B:345 | 96.0 | 0.662 | -105.4 | 8.4 | NA | NA | NA | ||||||||||||||
| PRO | C:345 | E:345 | 111.0 | 0.766 | T | -74.5 | -10.6 | NA | NA | NA | |||||||||||||
| 6a8p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2018-09-26 | PRO | A:345 | A:345 | 112.0 | 0.772 | T | -64.1 | -24.6 | 112.0 | 0.772 | 0.0 | ||||||
| PRO | B:345 | B:345 | 105.0 | 0.724 | T | -64.8 | -26.5 | NA | NA | NA | |||||||||||||
| PRO | C:345 | C:345 | 108.0 | 0.745 | T | -65.9 | -27.6 | NA | NA | NA | |||||||||||||
| 6kzb | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2020-12-09 | PRO | A:345 | A:345 | 108.0 | 0.745 | T | -90.6 | -0.2 | 108.0 | 0.745 | 0.0 | ||||||
| PRO | B:345 | B:345 | 103.0 | 0.71 | T | -90.2 | 0.3 | NA | NA | NA | |||||||||||||
| PRO | C:345 | C:345 | 109.0 | 0.752 | T | -90.3 | 0.4 | NA | NA | NA | |||||||||||||
| 3s3j | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | PRO | A:352 | A:345 | 114.0 | 0.786 | T | -63.0 | -13.3 | 114.0 | 0.786 | 0.0 |
HOH |
2.957 |
O |
O |
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| 3s3p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | PRO | A:352 | A:345 | 116.0 | 0.8 | T | -74.0 | -14.1 | 116.0 | 0.8 | 0.0 |
HOH |
3.861 |
N |
O |
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| 3s3s | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | PRO | A:352 | A:345 | 114.0 | 0.786 | T | -67.5 | -15.7 | 114.0 | 0.786 | 0.0 |
HOH |
3.623 |
CD |
O |
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| 3ly6 | 1 | P21980 | 99.85 | 0.0 |
X-RAY |
2010-08-18 | PRO | A:345 | A:345 | 105.0 | 0.724 | T | -71.7 | 41.4 | 105.0 | 0.724 | 0.0 | ||||||
| PRO | B:345 | B:345 | 104.0 | 0.717 | T | -71.3 | 40.9 | NA | NA | NA | |||||||||||||
| PRO | C:345 | C:345 | 104.0 | 0.717 | T | -70.1 | 41.7 | NA | NA | NA | |||||||||||||
| 1kv3 | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2002-03-13 | PRO | A:345 | A:345 | 109.0 | 0.752 | T | -66.4 | -22.2 | 109.0 | 0.752 | 0.0 |
HOH |
4.835 |
CB |
O |
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| PRO | B:345 | B:345 | 108.0 | 0.745 | T | -63.5 | -19.6 | NA | NA | NA | |||||||||||||
| PRO | C:345 | C:345 | 108.0 | 0.745 | T | -63.3 | -21.6 | 108.0 | 0.745 | 0.0 |
HOH |
8.383 |
CG |
O |
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| PRO | D:345 | D:345 | 109.0 | 0.752 | T | -65.6 | -22.4 | NA | NA | NA | |||||||||||||
| PRO | E:345 | E:345 | 110.0 | 0.759 | T | -65.4 | -19.3 | NA | NA | NA | |||||||||||||
| PRO | F:345 | F:345 | 109.0 | 0.752 | T | -65.8 | -19.9 | NA | NA | NA | |||||||||||||
| 2q3z | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2007-10-23 | PRO | A:345 | A:345 | 115.0 | 0.793 | T | -64.1 | -13.7 | 115.0 | 0.793 | 0.0 |
HOH |
3.770 |
CD |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p21980-f1 | 1 | P21980 | 100.0 | 0.0 | PRO | A:345 | A:345 | 113.0 | 0.779 | T | -65.9 | -13.1 | |