Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 36775176 | . | C | A | CCDS13302.1:NM_004613.2:c.802Ggc>Tgc_NP_004604.2:p.268G>C | Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA. |
|---|---|---|---|---|---|---|---|
|
|
|
|
|
PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4pyg | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2015-02-11 | GLY | A:268 | A:268 | 69.0 | 0.92 | T | 56.1 | 41.1 | 69.0 | 0.92 | 0.0 |
HOH |
8.942 |
N |
O |
||
| GLY | B:268 | B:268 | 65.0 | 0.867 | T | 43.4 | 42.9 | NA | NA | NA | |||||||||||||
| GLY | C:268 | E:268 | 58.0 | 0.773 | T | 40.5 | 66.0 | NA | NA | NA | |||||||||||||
| 6a8p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2018-09-26 | GLY | A:268 | A:268 | 60.0 | 0.8 | T | 59.3 | 34.9 | 60.0 | 0.8 | 0.0 | ||||||
| GLY | B:268 | B:268 | 64.0 | 0.853 | T | 60.7 | 36.5 | NA | NA | NA | |||||||||||||
| GLY | C:268 | C:268 | 66.0 | 0.88 | T | 60.3 | 34.7 | NA | NA | NA | |||||||||||||
| 6kzb | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2020-12-09 | GLY | A:268 | A:268 | 49.0 | 0.653 | T | 57.1 | -116.6 | 49.0 | 0.653 | 0.0 | ||||||
| GLY | B:268 | B:268 | 62.0 | 0.827 | T | 51.1 | 42.0 | NA | NA | NA | |||||||||||||
| GLY | C:268 | C:268 | 62.0 | 0.827 | T | 51.6 | 37.9 | NA | NA | NA | |||||||||||||
| 3s3j | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | GLY | A:275 | A:268 | 60.0 | 0.8 | T | 80.1 | 32.9 | 60.0 | 0.8 | 0.0 | ||||||
| 3s3p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | GLY | A:275 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 3s3s | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | GLY | A:275 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 3ly6 | 1 | P21980 | 99.85 | 0.0 |
X-RAY |
2010-08-18 | GLY | A:268 | A:268 | 61.0 | 0.813 | T | 49.5 | 51.9 | 61.0 | 0.813 | 0.0 | ||||||
| GLY | B:268 | B:268 | 63.0 | 0.84 | T | 51.2 | 51.3 | NA | NA | NA | |||||||||||||
| GLY | C:268 | C:268 | 62.0 | 0.827 | T | 51.5 | 50.3 | NA | NA | NA | |||||||||||||
| 1kv3 | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2002-03-13 | GLY | A:268 | A:268 | 59.0 | 0.787 | T | 65.5 | 38.0 | 59.0 | 0.787 | 0.0 |
HOH |
4.180 |
O |
O |
||
| GLY | B:268 | B:268 | 59.0 | 0.787 | T | 65.5 | 36.1 | NA | NA | NA | |||||||||||||
| GLY | C:268 | C:268 | 58.0 | 0.773 | T | 63.7 | 38.0 | 58.0 | 0.773 | 0.0 |
HOH |
6.837 |
CA |
O |
|||||||||
| GLY | D:268 | D:268 | 61.0 | 0.813 | T | 66.7 | 34.0 | NA | NA | NA | |||||||||||||
| GLY | E:268 | E:268 | 58.0 | 0.773 | T | 66.1 | 36.7 | NA | NA | NA | |||||||||||||
| GLY | F:268 | F:268 | 60.0 | 0.8 | T | 65.7 | 37.5 | NA | NA | NA | |||||||||||||
| 2q3z | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2007-10-23 | GLY | A:268 | A:268 | 58.0 | 0.773 | T | 56.1 | 43.0 | 58.0 | 0.773 | 0.0 |
HOH |
5.144 |
O |
O |
||
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p21980-f1 | 1 | P21980 | 100.0 | 0.0 | GLY | A:268 | A:268 | 56.0 | 0.747 | T | 73.0 | 41.3 | |