Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 36775193 . C A CCDS13302.1:NM_004613.2:c.785cGg>cTg_NP_004604.2:p.262R>L Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4pyg 1 P21980 100.0 0.0 X-RAY
 2015-02-11 ARG A:262 A:262 53.0 0.236 H -79.4 -34.4 53.0 0.236 0.0 HOH
 3.744
 CD
 O
ARG B:262 B:262 67.0 0.298 H -70.7 -44.0 NA NA NA
ARG C:262 E:262 56.0 0.249 H -59.1 -59.4 NA NA NA
6a8p 1 P21980 100.0 0.0 X-RAY
 2018-09-26 ARG A:262 A:262 57.0 0.253 H -65.2 -42.6 57.0 0.253 0.0
ARG B:262 B:262 56.0 0.249 H -64.9 -42.5 NA NA NA
ARG C:262 C:262 57.0 0.253 H -65.7 -42.1 NA NA NA
6kzb 1 P21980 100.0 0.0 X-RAY
 2020-12-09 ARG A:262 A:262 52.0 0.231 H -65.6 -39.0 52.0 0.231 0.0
ARG B:262 B:262 52.0 0.231 H -66.1 -40.0 NA NA NA
ARG C:262 C:262 56.0 0.249 H -65.2 -42.2 NA NA NA
3s3j 1 P21980 100.0 0.0 X-RAY
 2012-06-06 ARG A:269 A:262 76.0 0.338 H -62.7 -51.8 76.0 0.338 0.0 HOH
 3.634
 NH1
 O
3s3p 1 P21980 100.0 0.0 X-RAY
 2012-06-06 ARG A:269 A:262 90.0 0.4 H -57.5 -52.1 90.0 0.4 0.0
3s3s 1 P21980 100.0 0.0 X-RAY
 2012-06-06 ARG A:269 A:262 98.0 0.436 H -60.1 -53.0 98.0 0.436 0.0 HOH
 4.605
 NH2
 O
3ly6 1 P21980 99.85 0.0 X-RAY
 2010-08-18 ARG A:262 A:262 61.0 0.271 H -67.5 -41.4 61.0 0.271 0.0
ARG B:262 B:262 63.0 0.28 H -65.5 -43.0 NA NA NA
ARG C:262 C:262 63.0 0.28 H -66.8 -42.7 NA NA NA
1kv3 1 P21980 99.27 0.0 X-RAY
 2002-03-13 ARG A:262 A:262 55.0 0.244 H -71.4 -47.6 55.0 0.244 0.0 HOH
 6.294
 NH1
 O
ARG B:262 B:262 56.0 0.249 H -73.5 -42.1 NA NA NA
ARG C:262 C:262 53.0 0.236 H -71.6 -45.3 53.0 0.236 0.0 HOH
 4.526
 O
 O
ARG D:262 D:262 56.0 0.249 H -74.3 -43.6 NA NA NA
ARG E:262 E:262 57.0 0.253 H -73.9 -46.4 NA NA NA
ARG F:262 F:262 53.0 0.236 H -72.1 -45.3 NA NA NA
2q3z 1 P21980 99.27 0.0 X-RAY
 2007-10-23 ARG A:262 A:262 85.0 0.378 H -70.3 -38.1 85.0 0.378 0.0 HOH
 6.506
 CG
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21980-f1 1 P21980 100.0 0.0 ARG A:262 A:262 43.0 0.191 H -62.8 -45.0