Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 36776403 | . | C | A | CCDS13302.1:NM_004613.2:c.641cGc>cTc_NP_004604.2:p.214R>L | Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4pyg | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2015-02-11 | ARG | A:214 | A:214 | 8.0 | 0.036 | T | -83.1 | 26.0 | 8.0 | 0.036 | 0.0 | ||||||
| ARG | B:214 | B:214 | 8.0 | 0.036 | T | -59.6 | 17.3 | NA | NA | NA | |||||||||||||
| ARG | C:214 | E:214 | 7.0 | 0.031 | G | -72.1 | 21.5 | NA | NA | NA | |||||||||||||
| 6a8p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2018-09-26 | ARG | A:214 | A:214 | 8.0 | 0.036 | T | -70.3 | -0.9 | 8.0 | 0.036 | 0.0 | ||||||
| ARG | B:214 | B:214 | 10.0 | 0.044 | T | -58.8 | -0.6 | NA | NA | NA | |||||||||||||
| ARG | C:214 | C:214 | 10.0 | 0.044 | T | -70.8 | -1.5 | NA | NA | NA | |||||||||||||
| 6kzb | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2020-12-09 | ARG | A:214 | A:214 | 7.0 | 0.031 | T | -74.2 | -0.2 | 7.0 | 0.031 | 0.0 | ||||||
| ARG | B:214 | B:214 | 7.0 | 0.031 | T | -77.2 | 2.8 | NA | NA | NA | |||||||||||||
| ARG | C:214 | C:214 | 6.0 | 0.027 | T | -71.9 | -4.5 | NA | NA | NA | |||||||||||||
| 3s3j | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | ARG | A:221 | A:214 | 12.0 | 0.053 | T | -59.3 | 5.1 | 12.0 | 0.053 | 0.0 |
SO4 HOH |
8.095 3.505 |
N CD |
O1 O |
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| 3s3p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | ARG | A:221 | A:214 | 11.0 | 0.049 | T | -71.3 | 2.8 | 11.0 | 0.049 | 0.0 |
SO4 HOH |
8.273 3.676 |
N NH1 |
O4 O |
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| 3s3s | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | ARG | A:221 | A:214 | 12.0 | 0.053 | T | -71.0 | 3.5 | 12.0 | 0.053 | 0.0 |
SO4 HOH |
8.545 2.871 |
N NH1 |
O4 O |
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| 3ly6 | 1 | P21980 | 99.85 | 0.0 |
X-RAY |
2010-08-18 | ARG | A:214 | A:214 | 10.0 | 0.044 | T | -70.9 | 20.5 | 10.0 | 0.044 | 0.0 | ||||||
| ARG | B:214 | B:214 | 11.0 | 0.049 | T | -70.6 | 21.2 | NA | NA | NA | |||||||||||||
| ARG | C:214 | C:214 | 9.0 | 0.04 | T | -69.9 | 20.1 | NA | NA | NA | |||||||||||||
| 1kv3 | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2002-03-13 | ARG | A:214 | A:214 | 7.0 | 0.031 | T | -78.0 | 24.6 | 7.0 | 0.031 | 0.0 |
HOH |
8.437 |
NE |
O |
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| ARG | B:214 | B:214 | 7.0 | 0.031 | T | -75.7 | 25.7 | NA | NA | NA | |||||||||||||
| ARG | C:214 | C:214 | 7.0 | 0.031 | T | -76.5 | 23.6 | 7.0 | 0.031 | 0.0 |
HOH |
7.429 |
N |
O |
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| ARG | D:214 | D:214 | 8.0 | 0.036 | T | -62.9 | 22.0 | NA | NA | NA | |||||||||||||
| ARG | E:214 | E:214 | 8.0 | 0.036 | T | -63.0 | 22.6 | NA | NA | NA | |||||||||||||
| ARG | F:214 | F:214 | 7.0 | 0.031 | T | -75.1 | 22.9 | NA | NA | NA | |||||||||||||
| 2q3z | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2007-10-23 | ARG | A:214 | A:214 | 9.0 | 0.04 | T | -67.7 | 4.1 | 9.0 | 0.04 | 0.0 |
SO4 HOH |
8.197 3.621 |
N NH1 |
O3 O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p21980-f1 | 1 | P21980 | 100.0 | 0.0 | ARG | A:214 | A:214 | 11.0 | 0.049 | T | -68.3 | 0.1 | |