Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 36784336 . G A CCDS13302.1:NM_004613.2:c.346Cgc>Tgc_NP_004604.2:p.116R>C Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA.
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4pyg 1 P21980 100.0 0.0 X-RAY
 2015-02-11 ARG A:116 A:116 118.0 0.524 E -103.2 119.6 118.0 0.524 0.0 HOH
 3.838
 NH1
 O
ARG B:116 B:116 117.0 0.52 E -98.9 130.6 NA NA NA
ARG C:116 E:116 116.0 0.516 E -92.3 118.0 NA NA NA
6a8p 1 P21980 100.0 0.0 X-RAY
 2018-09-26 ARG A:116 A:116 114.0 0.507 E -104.7 127.5 114.0 0.507 0.0
ARG B:116 B:116 109.0 0.484 E -107.4 132.8 NA NA NA
ARG C:116 C:116 104.0 0.462 E -102.1 127.5 NA NA NA
6kzb 1 P21980 100.0 0.0 X-RAY
 2020-12-09 ARG A:116 A:116 112.0 0.498 E -108.4 120.4 112.0 0.498 0.0
ARG B:116 B:116 119.0 0.529 E -107.4 120.9 NA NA NA
ARG C:116 C:116 114.0 0.507 E -107.8 122.7 NA NA NA
3s3j 1 P21980 100.0 0.0 X-RAY
 2012-06-06 ARG A:123 A:116 114.0 0.507 E -101.2 126.9 114.0 0.507 0.0 HOH
 3.077
 NE
 O
3s3p 1 P21980 100.0 0.0 X-RAY
 2012-06-06 ARG A:123 A:116 117.0 0.52 E -93.4 125.2 117.0 0.52 0.0 HOH
 2.887
 NH2
 O
3s3s 1 P21980 100.0 0.0 X-RAY
 2012-06-06 ARG A:123 A:116 114.0 0.507 E -98.3 128.9 114.0 0.507 0.0 HOH
 2.923
 O
 O
3ly6 1 P21980 99.85 0.0 X-RAY
 2010-08-18 ARG A:116 A:116 114.0 0.507 E -107.9 116.5 114.0 0.507 0.0
ARG B:116 B:116 114.0 0.507 E -106.4 117.2 NA NA NA
ARG C:116 C:116 114.0 0.507 E -106.5 116.9 NA NA NA
1kv3 1 P21980 99.27 0.0 X-RAY
 2002-03-13 ARG A:116 A:116 153.0 0.68 E -105.0 124.3 153.0 0.68 0.0
ARG B:116 B:116 155.0 0.689 E -104.1 123.7 NA NA NA
ARG C:116 C:116 155.0 0.689 E -104.6 124.8 155.0 0.689 0.0 HOH
 2.797
 CD
 O
ARG D:116 D:116 153.0 0.68 E -104.4 123.2 NA NA NA
ARG E:116 E:116 155.0 0.689 E -104.8 123.1 NA NA NA
ARG F:116 F:116 155.0 0.689 E -104.9 125.0 NA NA NA
2q3z 1 P21980 99.27 0.0 X-RAY
 2007-10-23 ARG A:116 A:116 112.0 0.498 E -98.0 125.6 112.0 0.498 0.0 HOH
 2.854
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p21980-f1 1 P21980 100.0 0.0 ARG A:116 A:116 113.0 0.502 E -101.0 128.5