Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr20 | 36789929 | . | C | A | CCDS13302.1:NM_004613.2:c.83cGg>cTg_NP_004604.2:p.28R>L | Homo sapiens transglutaminase 2 (TGM2), transcript variant 1, mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 4pyg | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2015-02-11 | ARG | A:28 | A:28 | 124.0 | 0.551 | S | -74.3 | -93.3 | 124.0 | 0.551 | 0.0 |
HOH |
2.973 |
NE |
O |
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| ARG | B:28 | B:28 | 118.0 | 0.524 | S | -90.2 | -88.8 | NA | NA | NA | |||||||||||||
| ARG | C:28 | E:28 | 130.0 | 0.578 | S | -90.5 | -71.6 | NA | NA | NA | |||||||||||||
| 6a8p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2018-09-26 | ARG | A:28 | A:28 | 55.0 | 0.244 | S | -85.1 | -80.6 | 55.0 | 0.244 | 0.0 | ||||||
| ARG | B:28 | B:28 | 103.0 | 0.458 | S | -85.1 | -57.6 | NA | NA | NA | |||||||||||||
| ARG | C:28 | C:28 | 89.0 | NA | S | -81.7 | -70.5 | NA | NA | NA | |||||||||||||
| 6kzb | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2020-12-09 | ARG | A:28 | A:28 | 77.0 | 0.342 | S | -124.9 | 103.5 | 77.0 | 0.342 | 0.0 | ||||||
| ARG | B:28 | B:28 | 68.0 | 0.302 | S | -121.9 | 95.8 | NA | NA | NA | |||||||||||||
| ARG | C:28 | C:28 | 62.0 | 0.276 | S | -125.6 | 104.0 | NA | NA | NA | |||||||||||||
| 3s3j | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | ARG | A:35 | A:28 | 51.0 | NA | S | -60.9 | -81.4 | 51.0 | NA | NA |
HOH |
6.512 |
N |
O |
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| 3s3p | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | ARG | A:35 | A:28 | 63.0 | NA | S | -81.6 | -45.2 | 63.0 | NA | NA |
HOH |
6.567 |
N |
O |
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| 3s3s | 1 | P21980 | 100.0 | 0.0 |
X-RAY |
2012-06-06 | ARG | A:35 | A:28 | 92.0 | NA | S | -71.2 | -33.9 | 92.0 | NA | NA |
HOH |
2.813 |
N |
O |
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| 3ly6 | 1 | P21980 | 99.85 | 0.0 |
X-RAY |
2010-08-18 | ARG | A:28 | A:28 | 85.0 | 0.378 | S | -133.6 | 119.6 | 85.0 | 0.378 | 0.0 | ||||||
| ARG | B:28 | B:28 | 85.0 | 0.378 | S | -134.4 | 119.6 | NA | NA | NA | |||||||||||||
| ARG | C:28 | C:28 | 83.0 | 0.369 | S | -135.3 | 119.2 | NA | NA | NA | |||||||||||||
| 1kv3 | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2002-03-13 | ARG | A:28 | A:28 | 143.0 | 0.636 | S | -142.2 | 109.9 | 143.0 | 0.636 | 0.0 |
HOH |
5.486 |
N |
O |
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| ARG | B:28 | B:28 | 143.0 | 0.636 | S | -142.3 | 110.3 | NA | NA | NA | |||||||||||||
| ARG | C:28 | C:28 | 147.0 | 0.653 | S | -142.9 | 110.9 | 147.0 | 0.653 | 0.0 |
HOH |
4.802 |
CD |
O |
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| ARG | D:28 | D:28 | 142.0 | 0.631 | S | -144.6 | 110.7 | NA | NA | NA | |||||||||||||
| ARG | E:28 | E:28 | 142.0 | 0.631 | S | -142.5 | 109.7 | NA | NA | NA | |||||||||||||
| ARG | F:28 | F:28 | 142.0 | 0.631 | S | -142.9 | 110.9 | NA | NA | NA | |||||||||||||
| 2q3z | 1 | P21980 | 99.27 | 0.0 |
X-RAY |
2007-10-23 | ARG | A:28 | A:28 | 207.0 | 0.92 | S | -64.4 | -31.2 | 207.0 | 0.92 | 0.0 |
HOH |
3.203 |
N |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p21980-f1 | 1 | P21980 | 100.0 | 0.0 | ARG | A:28 | A:28 | 141.0 | 0.627 | S | -81.1 | -54.0 | |