Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 43034806 . C A CCDS42876.1:NM_175914.4:c.158tCg>tAg_NP_787110.2:p.53S>* Homo sapiens hepatocyte nuclear factor 4 alpha (HNF4A), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4iqr 1 P41235 97.58 0.0 X-RAY
 2013-03-20 SER A:36 A:66 27.0 0.235 E -76.9 104.4 27.0 0.235 0.0 DC
DT
DA
ZN
 9.631
7.565
8.772
6.208
 CA
CA
N
O
 O3'
OP1
OP2
ZN
SER B:36 B:66 35.0 0.304 E -53.2 105.8 35.0 0.304 0.0 DA
DA
ZN
 8.160
8.549
6.605
 OG
N
O
 OP2
OP1
ZN
SER E:36 E:66 24.0 0.209 E -65.0 106.6 NA NA NA
SER F:36 F:66 48.0 0.417 E -68.9 101.1 NA NA NA
3cbb 3 P41235 100.0 2e-56 X-RAY
 2008-10-07 SER C:18 A:66 39.0 0.339 E -76.7 126.8 39.0 0.339 0.0 DA
DA
ZN
HOH
 8.078
8.825
6.539
6.913
 CA
N
O
N
 OP2
OP2
ZN
O
SER D:18 B:66 30.0 0.261 E -68.5 123.9 30.0 0.261 0.0 DA
DA
ZN
HOH
 7.676
9.009
6.490
2.759
 CA
N
O
OG
 OP2
OP2
ZN
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p41235-f1 1 P41235 97.68 0.0 SER A:75 A:75 30.0 0.261 E -63.8 119.6