Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 43034835 . C A CCDS42876.1:NM_175914.4:c.187Cgg>Agg_NP_787110.2:p.63R>R Homo sapiens hepatocyte nuclear factor 4 alpha (HNF4A), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4iqr 1 P41235 97.58 0.0 X-RAY
 2013-03-20 ARG A:46 A:76 87.0 0.387 H -66.5 -41.4 87.0 0.387 0.0 DA
DG
DG
DT
DC
DT
DG
DA
DC
DC
DT
 5.727
3.499
3.001
3.860
6.718
7.881
6.059
5.888
6.954
7.770
9.221
 NH1
NH1
NH1
NH2
NH2
NH2
NH2
NH2
NH2
NH1
NH1
 C2'
C8
N7
C7
N4
C7
O6
N6
N4
N4
N3
ARG B:46 B:76 94.0 0.418 H -53.7 -40.8 94.0 0.418 0.0 DA
DA
DG
DG
DT
DC
DT
DG
DA
DC
DC
DT
DT
 8.380
4.043
2.947
3.062
5.498
8.761
8.646
7.067
5.654
6.213
7.978
9.297
9.973
 NH1
NH1
NH1
NH2
NH2
NH2
C
NH2
NH2
NH2
NH2
NH1
NH1
 O3'
C2'
OP2
N7
O4
N4
OP2
O6
N6
N4
N4
O2
O2
ARG E:46 E:76 94.0 0.418 H -53.1 -49.4 NA NA NA
ARG F:46 F:76 94.0 0.418 H -60.2 -64.2 NA NA NA
3cbb 3 P41235 100.0 2e-56 X-RAY
 2008-10-07 ARG C:28 A:76 84.0 0.373 H -54.5 -50.4 84.0 0.373 0.0 DA
DG
DT
DC
DC
DT
DT
DG
DG
DA
DC
HOH
 6.027
3.826
2.802
4.233
6.501
9.791
6.884
5.194
4.880
6.322
9.142
2.184
 CD
CD
NH1
NH2
NH2
NH2
NH2
NH2
NH2
NH2
NH2
NE
 O3'
OP2
C7
N4
N4
C2'
C7
O6
O6
N6
N4
O
ARG D:28 B:76 64.0 0.284 H -53.2 -53.2 64.0 0.284 0.0 DA
DA
DG
DT
DT
DC
DC
DT
DG
DA
DA
DC
HOH
 9.585
5.777
3.588
3.464
4.667
7.089
9.771
7.503
5.604
4.799
6.206
8.666
2.626
 NH1
CD
CD
CZ
NH2
NH2
C
NH2
NH2
NH2
NH2
NH2
NH2
 C2'
O3'
OP2
C7
O4
N4
OP2
C7
N7
N6
N6
N4
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p41235-f1 1 P41235 97.68 0.0 ARG A:85 A:85 94.0 0.418 H -51.9 -49.8