Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 43034842 . G A CCDS42876.1:NM_175914.4:c.194aGc>aAc_NP_787110.2:p.65S>N Homo sapiens hepatocyte nuclear factor 4 alpha (HNF4A), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4iqr 1 P41235 97.58 0.0 X-RAY
 2013-03-20 SER A:48 A:78 3.0 0.026 H -57.7 -57.2 0.0 0.0 0.026 B:P41235:0.026
 DT
DT
 8.029
6.041
 OG
OG
 O3'
OP2
SER B:48 B:78 13.0 0.113 H -78.6 -39.5 13.0 0.113 0.0 DC
DT
 8.230
6.439
 OG
OG
 O3'
OP2
SER E:48 E:78 3.0 0.026 H -54.5 -56.4 NA NA NA
SER F:48 F:78 8.0 0.07 H -66.4 -45.4 NA NA NA
3cbb 3 P41235 100.0 2e-56 X-RAY
 2008-10-07 SER C:30 A:78 0.0 0.0 H -63.4 -47.4 0.0 0.0 0.0 DT
DT
DG
HOH
 7.975
5.929
9.809
4.815
 OG
OG
OG
OG
 O3'
OP2
OP2
O
SER D:30 B:78 4.0 0.035 H -58.4 -41.7 4.0 0.035 0.0 DA
DC
DT
DG
HOH
 9.933
7.797
6.065
9.863
6.591
 N
N
OG
OG
OG
 O3'
OP1
OP2
OP2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p41235-f1 1 P41235 97.68 0.0 SER A:87 A:87 3.0 0.026 H -66.2 -42.2