Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 43042336 . G A CCDS42876.1:NM_175914.4:c.322Gtc>Atc_NP_787110.2:p.108V>I Homo sapiens hepatocyte nuclear factor 4 alpha (HNF4A), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4iqr 1 P41235 97.58 0.0 X-RAY
 2013-03-20 VAL A:91 A:121 17.0 0.11 S -75.1 111.0 17.0 0.11 0.0 DT
DA
DG
DG
 8.653
5.041
4.019
7.410
 N
CA
C
CG1
 O3'
O3'
OP1
OP2
VAL B:91 B:121 18.0 0.116 -95.4 123.3 18.0 0.116 0.0 DA
DA
DG
DG
 8.604
4.998
4.018
7.906
 N
CA
C
CG1
 O3'
O3'
OP1
OP2
VAL E:91 E:121 18.0 0.116 S -111.6 93.4 NA NA NA
VAL F:91 F:121 19.0 0.123 -98.4 126.5 NA NA NA
3cbb 3 P41235 100.0 2e-56 X-RAY
 2008-10-07 VAL C:73 A:121 18.0 0.116 -85.3 129.3 18.0 0.116 0.0 DA
DA
DG
DT
HOH
 8.102
5.005
3.730
8.181
4.142
 N
C
C
CG1
O
 O3'
O3'
OP1
OP2
O
VAL D:73 B:121 18.0 0.116 -83.8 122.0 18.0 0.116 0.0 DA
DA
DG
DT
HOH
 8.126
4.910
3.610
7.879
3.854
 N
C
C
CG1
O
 O3'
O3'
OP1
OP2
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p41235-f1 1 P41235 97.68 0.0 VAL A:130 A:130 15.0 0.097 -92.3 94.7