Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 43042349 . G A CCDS42876.1:NM_175914.4:c.335cGg>cAg_NP_787110.2:p.112R>Q Homo sapiens hepatocyte nuclear factor 4 alpha (HNF4A), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4iqr 1 P41235 97.58 0.0 X-RAY
 2013-03-20 ARG A:95 NA:NA DO NA DO DO DO NA NA NA
ARG B:95 B:125 201.0 0.893 -118.2 -153.2 141.0 0.627 0.266 A:P41235:0.267
 DA
DA
DA
DG
DG
DT
DT
DT
DT
DG
 8.459
6.633
4.299
3.264
2.624
7.195
6.149
3.948
3.304
5.786
 NH2
NH1
NH1
NE
N
O
NH1
NH1
NH1
NH2
 C2
C2
N3
C4'
OP1
OP2
O2
O2
C4'
OP1
ARG E:95 NA:NA DO NA DO DO DO NA NA NA
ARG F:95 F:125 183.0 0.813 -126.6 -177.5 NA NA NA
3cbb 3 P41235 100.0 2e-56 X-RAY
 2008-10-07 ARG C:77 NA:NA DO NA DO DO DO NA NA NA
ARG D:77 B:125 171.0 0.76 -142.0 -179.1 80.0 0.356 0.404 C:P41235:0.404
 DA
DA
DG
DT
DT
DT
DT
DT
DG
HOH
 8.762
5.741
3.424
2.565
5.384
8.433
5.966
4.252
6.372
2.557
 NH1
NH2
CG
N
O
NH1
NH1
NH1
NH1
NH1
 C2
O3'
O3'
OP1
OP2
O2
O3'
C5'
OP1
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p41235-f1 1 P41235 97.68 0.0 ARG A:134 A:134 178.0 0.791 -117.3 164.6