Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 50090553 . C A CCDS13437.1:NM_173091.3:c.1672Gtc>Ttc_NP_775114.1:p.558V>F Homo sapiens nuclear factor of activated T-cells 2 (NFATC2), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2as5 3 Q13469 100.0 0.0 X-RAY
2006-08-08 VAL E:167 N:558 34.0 0.219 E -102.0 110.4 34.0 0.219 0.0
VAL F:167 M:558 33.0 0.213 E -95.0 110.2 NA NA NA
2o93 3 Q13469 99.3 0.0 X-RAY
2007-06-19 VAL C:181 L:558 4.0 0.026 E -74.2 149.2 4.0 0.026 0.0
VAL D:181 M:558 6.0 0.039 E -93.9 113.8 6.0 0.039 0.0
VAL E:181 O:558 2.0 0.013 E -61.8 178.0 2.0 0.013 0.0
1a02 3 Q13469 99.3 0.0 X-RAY
1998-05-27 VAL C:181 N:558 39.0 0.252 E -82.4 118.4 31.0 0.2 0.052 D:P01100:0.052
HOH
8.916
CG1
O
1pzu 3 Q13469 99.3 0.0 X-RAY
2003-09-09 VAL G:181 B:558 16.0 0.103 E -98.1 121.7 16.0 0.103 0.0
VAL H:181 D:558 17.0 0.11 E -97.6 122.2 17.0 0.11 0.0
VAL I:181 H:558 17.0 0.11 E -97.4 121.1 NA NA NA
VAL J:181 I:558 16.0 0.103 E -98.7 122.9 NA NA NA
VAL K:181 L:558 17.0 0.11 E -97.7 122.2 NA NA NA
VAL L:181 M:558 17.0 0.11 E -98.3 122.9 NA NA NA
1p7h 3 Q13469 100.0 0.0 X-RAY
2003-09-23 VAL E:166 L:558 6.0 0.039 E -97.9 116.3 6.0 0.039 0.0 HOH
3.674
N
O
VAL F:166 M:558 13.0 0.084 E -91.0 130.7 13.0 0.084 0.0 HOH
2.763
CA
O
VAL G:166 N:558 7.0 0.045 E -98.5 116.4 NA NA NA
VAL H:166 O:558 13.0 0.084 E -90.5 130.6 NA NA NA
1owr 3 Q13469 100.0 0.0 X-RAY
2004-02-10 VAL I:164 M:558 8.0 0.052 E -87.0 122.0 8.0 0.052 0.0
VAL J:164 N:558 7.0 0.045 E -89.1 111.0 NA NA NA
VAL K:164 P:558 8.0 0.052 E -89.0 110.5 NA NA NA
VAL L:164 Q:558 7.0 0.045 E -83.5 117.8 NA NA NA
1s9k 3 Q13469 100.0 0.0 X-RAY
2005-06-14 VAL C:160 C:558 31.0 0.2 E -85.0 109.5 31.0 0.2 0.0
3qrf 1 Q13469 97.88 0.0 X-RAY
2011-04-20 VAL A:166 N:558 38.0 0.245 -76.0 133.6 38.0 0.245 0.0
VAL F:166 M:558 38.0 0.245 -76.2 133.4 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13469-f1 1 Q13469 99.24 0.0 VAL A:558 A:558 21.0 0.135 E -74.5 124.1