Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr20 50092097 . C A CCDS13437.1:NM_173091.3:c.1433cGa>cTa_NP_775114.1:p.478R>L Homo sapiens nuclear factor of activated T-cells 2 (NFATC2), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
2as5 3 Q13469 100.0 0.0 X-RAY
 2006-08-08 ARG E:87 N:478 93.0 0.413 E -65.7 124.3 93.0 0.413 0.0 DT
DT
HOH
 9.325
7.743
8.474
 O
O
N
 O3'
OP2
O
ARG F:87 M:478 92.0 0.409 E -67.7 129.8 NA NA NA
2o93 3 Q13469 99.3 0.0 X-RAY
 2007-06-19 ARG C:101 L:478 76.0 0.338 E -74.7 119.6 76.0 0.338 0.0
ARG D:101 M:478 95.0 0.422 E -75.4 121.3 95.0 0.422 0.0 DA
DG
 8.514
6.820
 O
O
 O3'
OP2
ARG E:101 O:478 92.0 0.409 E -81.0 113.3 92.0 0.409 0.0
1a02 3 Q13469 99.3 0.0 X-RAY
 1998-05-27 ARG C:101 N:478 20.0 NA E -72.4 91.2 20.0 NA NA HOH
 8.397
 N
 O
1pzu 3 Q13469 99.3 0.0 X-RAY
 2003-09-09 ARG G:101 B:478 79.0 0.351 E -77.8 96.7 79.0 0.351 0.0 DA
DA
 8.087
6.929
 O
O
 C3'
OP2
ARG H:101 D:478 78.0 0.347 E -79.6 98.3 78.0 0.347 0.0 DT
DT
DG
 7.869
5.523
6.631
 O
O
O
 O3'
OP1
OP2
ARG I:101 H:478 79.0 0.351 E -78.8 98.8 NA NA NA
ARG J:101 I:478 79.0 0.351 E -78.7 98.7 NA NA NA
ARG K:101 L:478 79.0 0.351 E -79.0 97.0 NA NA NA
ARG L:101 M:478 79.0 0.351 E -79.0 98.5 NA NA NA
1p7h 3 Q13469 100.0 0.0 X-RAY
 2003-09-23 ARG E:86 L:478 12.0 NA E -63.3 82.4 12.0 NA NA HOH
 4.561
 C
 O
ARG F:86 M:478 14.0 NA E -74.4 120.6 14.0 NA NA DA
DT
HOH
 9.709
9.671
3.568
 O
O
O
 O3'
OP2
O
ARG G:86 N:478 11.0 NA E -64.4 83.1 NA NA NA
ARG H:86 O:478 14.0 NA E -74.0 120.3 NA NA NA
1owr 3 Q13469 100.0 0.0 X-RAY
 2004-02-10 ARG I:84 M:478 95.0 0.422 E -78.6 114.4 95.0 0.422 0.0 DT
DG
DC
 9.172
7.088
6.582
 O
O
O
 O3'
OP1
OP2
ARG J:84 N:478 81.0 0.36 E -89.9 117.5 NA NA NA
ARG K:84 P:478 98.0 0.436 E -84.1 115.6 NA NA NA
ARG L:84 Q:478 91.0 0.404 E -74.0 115.5 NA NA NA
1s9k 3 Q13469 100.0 0.0 X-RAY
 2005-06-14 ARG C:80 C:478 21.0 NA E -78.9 113.5 21.0 NA NA
3qrf 1 Q13469 97.88 0.0 X-RAY
 2011-04-20 ARG A:86 N:478 101.0 0.449 E -55.1 134.3 101.0 0.449 0.0 DT
DT
 8.382
6.828
 O
O
 O3'
OP2
ARG F:86 M:478 102.0 0.453 E -54.5 133.6 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q13469-f1 1 Q13469 99.24 0.0 ARG A:478 A:478 100.0 0.444 E -73.4 110.8