Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr21 44179142 . C A CCDS13690.1:NM_002606.2:c.844Ctc>Atc_NP_002597.1:p.282L>I Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4qge 1 K7AGW3 84.65 0.0 X-RAY
 2014-12-10 LEU A:222 A:222 4.0 0.024 T -74.6 -4.0 4.0 0.024 0.0 HOH
 3.574
 O
 O
LEU B:222 B:222 4.0 0.024 T -79.3 -6.3 4.0 0.024 0.0 HOH
 3.717
 CA
 O
4y86 1 O76083 84.65 0.0 X-RAY
 2015-09-16 LEU A:222 A:222 3.0 0.018 T -79.3 -8.0 3.0 0.018 0.0 HOH
 3.471
 O
 O
LEU B:222 B:222 3.0 0.018 T -83.1 -3.1 3.0 0.018 0.0 HOH
 3.400
 O
 O
4y87 1 O76083 84.65 0.0 X-RAY
 2015-09-16 LEU A:222 A:222 3.0 0.018 H -68.7 -11.1 3.0 0.018 0.0
LEU B:222 B:222 2.0 0.012 T -84.7 2.9 2.0 0.012 0.0
4y8c 1 O76083 84.65 0.0 X-RAY
 2015-09-16 LEU A:222 A:222 3.0 0.018 T -83.5 -4.6 3.0 0.018 0.0
LEU B:222 B:222 3.0 0.018 T -78.8 1.1 3.0 0.018 0.0
3qi3 1 O76083 84.49 0.0 X-RAY
 2011-04-27 LEU A:222 A:222 2.0 0.012 T -76.0 -9.8 2.0 0.012 0.0
LEU B:222 B:222 1.0 0.006 T -76.6 -4.5 NA NA NA
3qi4 1 O76083 84.49 0.0 X-RAY
 2011-04-27 LEU A:222 A:222 3.0 0.018 T -77.8 -4.3 3.0 0.018 0.0
LEU B:222 B:222 4.0 0.024 T -85.6 -3.2 4.0 0.024 0.0
2yy2 1 O76083 100.0 0.0 X-RAY
 2007-10-30 LEU A:49 A:222 2.0 0.012 T -90.7 -3.7 2.0 0.012 0.0 HOH
 4.323
 O
 O
LEU B:49 B:222 3.0 0.018 T -83.6 2.0 3.0 0.018 0.0 HOH
 4.251
 O
 O
2hd1 1 Q53Y40 100.0 0.0 X-RAY
 2006-06-27 LEU A:42 A:222 2.0 0.012 T -78.4 -4.9 2.0 0.012 0.0 HOH
 5.083
 C
 O
LEU B:42 B:222 3.0 0.018 T -79.4 -2.1 NA NA NA
3k3e 1 O76083 100.0 0.0 X-RAY
 2010-02-16 LEU A:42 A:222 3.0 0.018 T -86.2 -8.5 3.0 0.018 0.0
LEU B:42 B:222 3.0 0.018 T -83.7 -4.8 3.0 0.018 0.0
3k3h 1 O76083 100.0 0.0 X-RAY
 2010-02-16 LEU A:42 A:222 3.0 0.018 T -85.1 -4.5 3.0 0.018 0.0
LEU B:42 B:222 3.0 0.018 T -81.1 -2.4 3.0 0.018 0.0
4gh6 1 O76083 100.0 0.0 X-RAY
 2012-10-03 LEU A:42 A:222 4.0 0.024 T -103.4 -7.0 4.0 0.024 0.0
LEU B:42 B:222 3.0 0.018 T -87.0 3.2 3.0 0.018 0.0
3n3z 1 O76083 99.69 0.0 X-RAY
 2011-04-13 LEU A:42 A:222 4.0 0.024 T -91.5 -3.3 4.0 0.024 0.0 HOH
 5.406
 O
 O
LEU B:42 B:222 4.0 0.024 T -85.8 -2.6 4.0 0.024 0.0 HOH
 5.054
 C
 O
3dy8 1 O76083 100.0 0.0 X-RAY
 2008-09-16 LEU A:45 A:222 2.0 0.012 T -73.7 -1.7 2.0 0.012 0.0 HOH
 3.709
 C
 O
LEU B:45 B:222 2.0 0.012 T -72.4 -1.2 NA NA NA
3dyl 1 O76083 100.0 0.0 X-RAY
 2008-09-16 LEU A:45 A:222 3.0 0.018 T -73.7 -6.0 3.0 0.018 0.0 HOH
 3.259
 CA
 O
LEU B:45 B:222 3.0 0.018 T -75.4 -0.9 NA NA NA
3dyn 1 O76083 100.0 0.0 X-RAY
 2008-09-16 LEU A:45 A:222 2.0 0.012 T -78.6 -5.1 2.0 0.012 0.0 HOH
 3.451
 C
 O
LEU B:45 B:222 2.0 0.012 T -73.1 -3.1 NA NA NA
3dyq 1 O76083 100.0 0.0 X-RAY
 2008-09-16 LEU A:45 A:222 2.0 0.012 T -79.5 -5.6 2.0 0.012 0.0 HOH
 3.292
 O
 O
LEU B:45 B:222 2.0 0.012 T -86.1 2.1 2.0 0.012 0.0 HOH
 3.257
 O
 O
3dys 1 O76083 100.0 0.0 X-RAY
 2008-09-16 LEU A:45 A:222 3.0 0.018 T -75.3 -5.2 3.0 0.018 0.0 HOH
 3.625
 O
 O
LEU B:45 B:222 2.0 0.012 T -77.4 -1.2 2.0 0.012 0.0 HOH
 3.654
 O
 O
3jsi 1 O76083 100.0 0.0 X-RAY
 2009-12-01 LEU A:45 A:222 0.0 0.0 T -75.9 -2.5 0.0 0.0 0.0 HOH
 5.313
 C
 O
LEU B:45 B:222 1.0 0.006 T -75.9 -2.1 NA NA NA
3jsw 1 O76083 100.0 0.0 X-RAY
 2009-12-01 LEU A:45 A:222 2.0 0.012 T -70.4 -2.4 2.0 0.012 0.0 HOH
 3.567
 O
 O
LEU B:45 B:222 2.0 0.012 T -74.8 -2.7 2.0 0.012 0.0 HOH
 3.740
 CA
 O
4e90 1 O76083 100.0 0.0 X-RAY
 2013-02-27 LEU A:45 A:222 2.0 0.012 T -78.7 -3.8 2.0 0.012 0.0 HOH
 3.547
 CA
 O
LEU B:45 B:222 2.0 0.012 T -79.3 -3.9 NA NA NA
4g2j 1 O76083 100.0 0.0 X-RAY
 2013-05-29 LEU A:45 A:222 2.0 0.012 T -78.8 -2.9 2.0 0.012 0.0 HOH
 3.410
 O
 O
LEU B:45 B:222 3.0 0.018 T -79.1 -2.9 NA NA NA
4g2l 1 O76083 100.0 0.0 X-RAY
 2013-05-29 LEU A:45 A:222 3.0 0.018 T -73.6 -1.3 3.0 0.018 0.0
LEU B:45 B:222 3.0 0.018 T -74.4 -1.1 NA NA NA
6a3n 1 O76083 100.0 0.0 X-RAY
 2019-04-10 LEU A:38 A:222 2.0 0.012 T -72.7 -2.2 2.0 0.012 0.0 HOH
 3.507
 O
 O
LEU B:38 B:222 3.0 0.018 T -87.0 -2.5 3.0 0.018 0.0 HOH
 5.952
 CA
 O
6lzz 1 O76083 100.0 0.0 X-RAY
 2021-02-24 LEU A:38 A:222 3.0 0.018 T -81.6 -0.1 3.0 0.018 0.0 HOH
 5.084
 C
 O
LEU B:38 B:222 0.0 0.0 T -95.8 -7.0 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o76083-f1 1 O76083 100.0 0.0 LEU A:282 A:282 3.0 0.018 T -72.0 -3.0