Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr21 44180444 . G A CCDS13690.1:NM_002606.2:c.904Gtc>Atc_NP_002597.1:p.302V>I Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
4qge 1 K7AGW3 84.65 0.0 X-RAY
 2014-12-10 VAL A:242 A:242 1.0 0.006 H -55.1 -50.4 1.0 0.006 0.0 HOH
 4.141
 CG2
 O
VAL B:242 B:242 1.0 0.006 H -57.4 -50.8 1.0 0.006 0.0 HOH
 4.239
 CG2
 O
4y86 1 O76083 84.65 0.0 X-RAY
 2015-09-16 VAL A:242 A:242 0.0 0.0 H -51.8 -53.6 0.0 0.0 0.0 HOH
 4.130
 CG2
 O
VAL B:242 B:242 0.0 0.0 H -57.0 -49.7 0.0 0.0 0.0 HOH
 4.125
 CG2
 O
4y87 1 O76083 84.65 0.0 X-RAY
 2015-09-16 VAL A:242 A:242 1.0 0.006 H -51.5 -39.1 1.0 0.006 0.0
VAL B:242 B:242 0.0 0.0 H -61.5 -47.7 0.0 0.0 0.0
4y8c 1 O76083 84.65 0.0 X-RAY
 2015-09-16 VAL A:242 A:242 0.0 0.0 H -56.7 -49.7 0.0 0.0 0.0
VAL B:242 B:242 0.0 0.0 H -64.2 -55.2 0.0 0.0 0.0
3qi3 1 O76083 84.49 0.0 X-RAY
 2011-04-27 VAL A:242 A:242 0.0 0.0 H -60.1 -46.9 0.0 0.0 0.0
VAL B:242 B:242 0.0 0.0 H -61.0 -46.7 NA NA NA
3qi4 1 O76083 84.49 0.0 X-RAY
 2011-04-27 VAL A:242 A:242 0.0 0.0 H -61.4 -44.1 0.0 0.0 0.0
VAL B:242 B:242 1.0 0.006 H -64.4 -45.6 1.0 0.006 0.0
2yy2 1 O76083 100.0 0.0 X-RAY
 2007-10-30 VAL A:69 A:242 1.0 0.006 H -59.6 -49.5 1.0 0.006 0.0 HOH
 7.546
 O
 O
VAL B:69 B:242 1.0 0.006 H -67.9 -48.0 1.0 0.006 0.0 HOH
 4.256
 CG2
 O
2hd1 1 Q53Y40 100.0 0.0 X-RAY
 2006-06-27 VAL A:62 A:242 1.0 0.006 H -62.7 -46.2 1.0 0.006 0.0 HOH
 4.212
 CG2
 O
VAL B:62 B:242 0.0 0.0 H -59.5 -50.9 NA NA NA
3k3e 1 O76083 100.0 0.0 X-RAY
 2010-02-16 VAL A:62 A:242 0.0 0.0 H -61.2 -52.2 0.0 0.0 0.0
VAL B:62 B:242 0.0 0.0 H -53.7 -56.0 0.0 0.0 0.0
3k3h 1 O76083 100.0 0.0 X-RAY
 2010-02-16 VAL A:62 A:242 0.0 0.0 H -61.5 -48.8 0.0 0.0 0.0
VAL B:62 B:242 0.0 0.0 H -69.0 -37.9 0.0 0.0 0.0
4gh6 1 O76083 100.0 0.0 X-RAY
 2012-10-03 VAL A:62 A:242 0.0 0.0 H -56.2 -59.5 0.0 0.0 0.0
VAL B:62 B:242 1.0 0.006 H -66.7 -44.2 1.0 0.006 0.0
3n3z 1 O76083 99.69 0.0 X-RAY
 2011-04-13 VAL A:62 A:242 0.0 0.0 H -56.7 -48.5 0.0 0.0 0.0 HOH
 4.309
 CG2
 O
VAL B:62 B:242 2.0 0.013 H -59.9 -46.3 2.0 0.013 0.0 HOH
 4.137
 CG2
 O
3dy8 1 O76083 100.0 0.0 X-RAY
 2008-09-16 VAL A:65 A:242 0.0 0.0 H -59.0 -51.1 0.0 0.0 0.0 HOH
 4.003
 CG2
 O
VAL B:65 B:242 0.0 0.0 H -59.0 -50.5 NA NA NA
3dyl 1 O76083 100.0 0.0 X-RAY
 2008-09-16 VAL A:65 A:242 0.0 0.0 H -50.1 -51.1 0.0 0.0 0.0 HOH
 4.198
 CG2
 O
VAL B:65 B:242 0.0 0.0 H -56.2 -52.2 NA NA NA
3dyn 1 O76083 100.0 0.0 X-RAY
 2008-09-16 VAL A:65 A:242 1.0 0.006 H -57.6 -50.0 1.0 0.006 0.0 HOH
 3.997
 CG2
 O
VAL B:65 B:242 0.0 0.0 H -57.9 -47.8 NA NA NA
3dyq 1 O76083 100.0 0.0 X-RAY
 2008-09-16 VAL A:65 A:242 1.0 0.006 H -57.3 -48.3 1.0 0.006 0.0 HOH
 4.345
 CG2
 O
VAL B:65 B:242 0.0 0.0 H -57.6 -48.3 0.0 0.0 0.0 HOH
 3.740
 CG2
 O
3dys 1 O76083 100.0 0.0 X-RAY
 2008-09-16 VAL A:65 A:242 0.0 0.0 H -56.8 -50.2 0.0 0.0 0.0 MN
HOH
 6.558
4.052
 O
CG2
 MN
O
VAL B:65 B:242 0.0 0.0 H -60.3 -51.0 0.0 0.0 0.0 MN
HOH
 6.791
3.988
 O
CG2
 MN
O
3jsi 1 O76083 100.0 0.0 X-RAY
 2009-12-01 VAL A:65 A:242 0.0 0.0 H -56.5 -46.8 0.0 0.0 0.0 HOH
 3.783
 CG2
 O
VAL B:65 B:242 1.0 0.006 H -56.7 -46.7 NA NA NA
3jsw 1 O76083 100.0 0.0 X-RAY
 2009-12-01 VAL A:65 A:242 0.0 0.0 H -57.4 -55.9 0.0 0.0 0.0 HOH
 4.219
 CG2
 O
VAL B:65 B:242 0.0 0.0 H -56.7 -51.4 0.0 0.0 0.0 HOH
 3.910
 CG2
 O
4e90 1 O76083 100.0 0.0 X-RAY
 2013-02-27 VAL A:65 A:242 0.0 0.0 H -58.6 -51.3 0.0 0.0 0.0 HOH
 3.996
 CG2
 O
VAL B:65 B:242 0.0 0.0 H -58.6 -51.4 NA NA NA
4g2j 1 O76083 100.0 0.0 X-RAY
 2013-05-29 VAL A:65 A:242 0.0 0.0 H -59.9 -49.0 0.0 0.0 0.0 HOH
 3.877
 CG2
 O
VAL B:65 B:242 0.0 0.0 H -59.8 -49.0 NA NA NA
4g2l 1 O76083 100.0 0.0 X-RAY
 2013-05-29 VAL A:65 A:242 1.0 0.006 H -46.6 -49.7 1.0 0.006 0.0
VAL B:65 B:242 0.0 0.0 H -48.8 -47.4 NA NA NA
6a3n 1 O76083 100.0 0.0 X-RAY
 2019-04-10 VAL A:58 A:242 0.0 0.0 H -56.8 -60.2 0.0 0.0 0.0 HOH
 6.738
 O
 O
VAL B:58 B:242 0.0 0.0 H -57.1 -53.6 0.0 0.0 0.0 HOH
 7.655
 O
 O
6lzz 1 O76083 100.0 0.0 X-RAY
 2021-02-24 VAL A:58 A:242 1.0 0.006 H -66.0 -44.5 1.0 0.006 0.0 HOH
 4.211
 CG2
 O
VAL B:58 B:242 0.0 0.0 H -65.6 -44.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-o76083-f1 1 O76083 100.0 0.0 VAL A:302 A:302 0.0 0.0 H -57.8 -52.6