Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr22 20230211 . G A CCDS13777.1:NM_023004.5:c.445Ctg>Ttg_NP_075380.1:p.149L>L Homo sapiens reticulon 4 receptor (RTN4R), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
5o0p 1 Q99PI8 88.89 0.0 X-RAY
 2017-10-18 LEU A:126 A:149 4.0 0.024 T -57.5 -35.6 4.0 0.024 0.0 HOH
 2.770
 O
 O
LEU B:126 B:149 6.0 0.035 T -59.4 -42.5 NA NA NA
5o0q 1 Q99PI8 88.89 0.0 X-RAY
 2017-10-18 LEU A:126 A:149 5.0 0.029 T -58.1 -48.2 5.0 0.029 0.0 HOH
 2.562
 O
 O
LEU B:126 B:149 4.0 0.024 T -57.3 -37.9 NA NA NA
LEU C:126 C:149 3.0 0.018 T -60.4 -35.6 NA NA NA
LEU D:126 D:149 4.0 0.024 T -57.6 -34.5 NA NA NA
5o0r 1 Q99PI8 88.89 0.0 X-RAY
 2017-11-08 LEU A:126 A:149 7.0 0.041 T -59.6 -30.7 7.0 0.041 0.0
LEU B:126 B:149 4.0 0.024 T -63.6 -36.6 4.0 0.024 0.0
1p8t 1 Q9BZR6 100.0 0.0 X-RAY
 2003-05-20 LEU A:123 A:149 4.0 0.024 T -41.1 -44.7 4.0 0.024 0.0
1ozn 1 Q9BZR6 100.0 0.0 X-RAY
 2003-05-20 LEU A:124 A:149 4.0 0.024 T -51.0 -41.8 4.0 0.024 0.0 HOH
 2.653
 O
 O
5o0k 1 Q99PI8 88.5 0.0 X-RAY
 2017-10-18 LEU A:126 A:149 4.0 0.024 T -61.5 -40.8 4.0 0.024 0.0 HOH
 2.828
 O
 O
LEU B:126 B:149 6.0 0.035 T -62.7 -39.5 NA NA NA
5o0l 1 Q99PI8 88.5 0.0 X-RAY
 2017-10-18 LEU A:126 A:149 4.0 0.024 T -62.4 -40.0 4.0 0.024 0.0 HOH
 2.430
 O
 O
LEU B:126 B:149 4.0 0.024 T -63.0 -45.4 4.0 0.024 0.0 HOH
 9.306
 O
 O
5o0m 1 Q99PI8 88.5 0.0 X-RAY
 2017-10-18 LEU A:126 A:149 5.0 0.029 T -57.3 -35.7 5.0 0.029 0.0 HOH
 2.635
 O
 O
LEU B:126 B:149 5.0 0.029 T -58.2 -39.8 NA NA NA
5o0n 1 Q99PI8 88.5 0.0 X-RAY
 2017-10-18 LEU A:126 A:149 4.0 0.024 T -60.0 -33.3 4.0 0.024 0.0 HOH
 4.868
 N
 O
5o0o 1 Q99PI8 88.5 0.0 X-RAY
 2017-10-18 LEU A:126 A:149 5.0 0.029 T -51.8 -44.1 5.0 0.029 0.0 HOH
 2.782
 O
 O
LEU B:126 B:149 5.0 0.029 T -54.6 -42.4 5.0 0.029 0.0 HOH
 2.655
 O
 O
LEU C:126 C:149 5.0 0.029 T -57.6 -37.7 5.0 0.029 0.0 HOH
 2.738
 O
 O
LEU D:126 D:149 5.0 0.029 T -58.5 -42.4 5.0 0.029 0.0 HOH
 2.824
 O
 O
LEU E:126 E:149 5.0 0.029 T -57.2 -36.0 5.0 0.029 0.0 HOH
 2.826
 O
 O
LEU F:126 F:149 5.0 0.029 T -56.0 -39.5 5.0 0.029 0.0 HOH
 2.841
 O
 O
LEU G:126 G:149 5.0 0.029 T -57.7 -42.2 5.0 0.029 0.0 HOH
 2.722
 O
 O
LEU H:126 H:149 5.0 0.029 T -55.8 -41.6 5.0 0.029 0.0 HOH
 2.850
 O
 O
3kj4 3 Q99M75 90.91 0.0 X-RAY
 2010-09-22 LEU C:123 A:149 6.0 0.035 T -81.5 -40.7 6.0 0.035 0.0
LEU F:123 D:149 6.0 0.035 T -82.2 -43.3 NA NA NA
7r86 1 Q99PI8 90.53 0.0 X-RAY
 2021-11-10 LEU A:125 A:149 5.0 0.029 T -53.7 -37.8 5.0 0.029 0.0 EDO
HOH
 6.846
2.737
 O
O
 O2
O
LEU B:125 B:149 4.0 0.024 T -55.2 -38.2 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q9bzr6-f1 1 Q9BZR6 100.0 0.0 LEU A:149 A:149 5.0 0.029 T -50.4 -37.2