Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr22 29755859 . T A CCDS13855.1:NM_001127.3:c.233aAg>aTg_NP_001118.3:p.78K>M Homo sapiens adaptor related protein complex 1 beta 1 subunit (AP1B1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6yaf 2 P63010 83.49 0.0 EM
 2020-07-29 LYS B:85 B:78 105.0 0.525 T -48.7 -39.6 95.0 0.475 0.05 C:P84092:0.05
6yah 2 P63010 83.49 0.0 EM
 2020-07-29 LYS B:85 B:78 105.0 0.525 T -48.7 -39.6 95.0 0.475 0.05 C:P84092:0.05
6cm9 2 Q10567 99.66 0.0 EM
 2018-08-08 LYS C:80 B:78 158.0 0.79 S -67.9 -34.5 133.0 0.665 0.125 G:P35585:0.125
6d83 2 Q10567 99.66 0.0 EM
 2018-08-08 LYS C:80 B:78 148.0 0.74 T -69.5 -29.9 128.0 0.64 0.1 G:P35585:0.1
6d84 2 Q10567 99.66 0.0 EM
 2018-08-08 LYS C:80 B:78 155.0 0.775 T -69.2 -27.5 130.0 0.65 0.125 G:P35585:0.125
LYS K:80 F:78 152.0 0.76 T -69.2 -27.6 127.0 0.635 0.125 O:P35585:0.125
6dff 2 Q10567 99.66 0.0 EM
 2018-08-08 LYS C:80 B:78 150.0 0.75 S -65.4 -45.0 100.0 0.5 0.25 G:P35585:0.25
4p6z 4 Q10567 99.66 0.0 X-RAY
 2014-05-21 LYS D:94 B:78 146.0 0.73 T -64.2 -32.6 143.0 0.715 0.015 C:P35585:0.015
4hmy 2 Q10567 99.49 0.0 X-RAY
 2013-03-06 LYS B:80 B:78 160.0 0.8 T -42.8 -59.7 112.0 0.56 0.24 C:P35585:0.24
4uqi 2 P63010 89.6 0.0 X-RAY
 2014-07-30 LYS B:78 B:78 140.0 0.7 H -85.4 -48.0 50.0 0.25 0.45 C:P84092:0.45
6cri 2 Q10567 99.65 0.0 EM
 2018-08-01 LYS B:65 B:78 154.0 0.77 T -67.1 -39.6 122.0 0.61 0.16 F:P35585:0.16
LYS J:65 I:78 149.0 0.745 T -67.1 -39.7 117.0 0.585 0.16 N:P35585:0.16
LYS R:65 J:78 152.0 0.76 T -67.1 -39.7 122.0 0.61 0.15 V:P35585:0.15
2xa7 2 P63010 93.06 0.0 X-RAY
 2010-07-21 LYS B:78 B:78 134.0 0.67 T -51.9 -50.9 105.0 0.525 0.145 C:P84092:0.145
6qh5 2 P63010 93.06 0.0 X-RAY
 2019-09-04 LYS B:78 B:78 134.0 0.67 H -79.6 -37.7 47.0 0.235 0.435 C:P84092:0.435
6qh6 2 P63010 93.06 0.0 X-RAY
 2019-09-04 LYS B:78 NA:NA DO NA DO DO DO NA NA NA
6qh7 2 P63010 93.06 0.0 X-RAY
 2019-09-04 LYS B:78 NA:NA DO NA DO DO DO NA NA NA
2jkr 2 P63010 93.06 0.0 X-RAY
 2008-10-28 LYS B:78 B:78 137.0 0.685 T -92.3 17.0 56.0 0.28 0.405 F:P84092:0.405
 HOH
 3.162
 NZ
 O
LYS C:78 E:78 138.0 0.69 T -91.1 16.5 NA NA NA
2jkt 2 P63010 93.06 0.0 X-RAY
 2008-10-28 LYS B:78 B:78 131.0 0.655 T -97.1 17.9 60.0 0.3 0.355 F:P84092:0.355
 HOH
 3.409
 NZ
 O
LYS C:78 E:78 133.0 0.665 T -96.9 18.1 NA NA NA
2vgl 2 P63010 93.06 0.0 X-RAY
 2007-12-25 LYS B:78 B:78 140.0 0.7 H -73.0 -35.1 44.0 0.22 0.48 C:P84092:0.48
6owo 2 Q9DBG3 93.06 0.0 EM
 2019-09-11 LYS B:78 B:78 138.0 0.69 H -114.3 -41.5 23.0 0.115 0.575 C:P84091:0.575
6owt 2 P62944 93.06 0.0 EM
 2019-09-25 LYS B:78 B:78 105.0 NA T -84.1 15.4 105.0 NA NA
6oxl 2 Q9DBG3 93.06 0.0 EM
 2019-09-11 LYS B:78 B:78 119.0 0.595 H -119.9 -35.9 51.0 0.255 0.34 C:P84091:0.34
6yae 2 P63010 93.06 0.0 EM
 2020-07-29 LYS B:78 B:78 139.0 0.695 T -72.3 -16.6 54.0 0.27 0.425 C:P84092:0.425
1w63 2 P52303 97.77 0.0 X-RAY
 2004-09-21 LYS B:78 B:78 112.0 0.56 H -64.0 -30.2 42.0 0.21 0.35 M:P35585:0.35
LYS D:78 D:78 111.0 0.555 H -64.0 -30.2 NA NA NA
LYS F:78 F:78 112.0 0.56 H -64.0 -30.3 NA NA NA
LYS H:78 H:78 108.0 0.54 H -64.0 -30.3 NA NA NA
LYS J:78 J:78 111.0 0.555 H -64.1 -30.2 NA NA NA
LYS L:78 L:78 111.0 0.555 H -64.0 -30.2 NA NA NA
6uri 4 P63010 92.55 0.0 X-RAY
 2020-07-29 LYS D:102 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q10567-f1 1 Q10567 99.89 0.0 LYS A:78 A:78 173.0 0.865 T -67.3 -31.0
af-p63010-f1 1 P63010 83.49 0.0 LYS A:78 A:78 141.0 0.705 T -66.5 -36.3