Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr22 | 30163526 | . | A | C | CCDS46680.1:NM_013387.3:c.139Atc>Ctc_NP_037519.2:p.47I>L | Homo sapiens ubiquinol-cytochrome c reductase, complex III subunit X (UQCR10), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
5xte | 4 | Q9UDW1 | 100.0 | 3e-41 |
EM |
2017-08-30 | ILE | D:46 | D:47 | 130.0 | 0.743 | H | -61.1 | -35.0 | 81.0 | 0.463 | 0.28 |
H:P08574:0.28 |
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ILE | O:46 | Q:47 | 125.0 | 0.714 | H | -63.1 | -35.0 | 75.0 | 0.429 | 0.285 |
S:P08574:0.286 |
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5xth | 61 | Q9UDW1 | 100.0 | 3e-41 |
EM |
2017-09-13 | ILE | JB:46 | AD:47 | 132.0 | 0.754 | H | -61.1 | -35.0 | 83.0 | 0.474 | 0.28 |
NB:P08574:0.28 |
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ILE | UB:46 | AQ:47 | 125.0 | 0.714 | H | -63.1 | -35.0 | 76.0 | 0.434 | 0.28 |
YB:P08574:0.28 |
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5xti | 61 | Q9UDW1 | 100.0 | 3e-41 |
EM |
2017-09-13 | ILE | JB:46 | AD:47 | 131.0 | 0.749 | H | -61.1 | -35.0 | 82.0 | 0.469 | 0.28 |
NB:P08574:0.28 |
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ILE | UB:46 | AQ:47 | 126.0 | 0.72 | H | -63.0 | -35.0 | 75.0 | 0.429 | 0.291 |
YB:P08574:0.291 |
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4d6t | 9 | P00130 | 87.3 | 4e-38 |
X-RAY |
2015-01-14 | ILE | J:47 | J:46 | 110.0 | 0.629 | H | -46.9 | -35.2 | 74.0 | 0.423 | 0.206 |
D:P00125:0.206 |
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ILE | T:47 | W:46 | 111.0 | 0.634 | H | -46.4 | -35.9 | NA | NA | NA | |||||||||||||
4d6u | 9 | P00130 | 87.3 | 4e-38 |
X-RAY |
2015-01-14 | ILE | J:47 | J:46 | 111.0 | 0.634 | H | -46.8 | -40.0 | 72.0 | 0.411 | 0.223 |
D:P00125:0.223 |
|||||
ILE | T:47 | W:46 | 112.0 | 0.64 | H | -45.4 | -39.3 | NA | NA | NA | |||||||||||||
5nmi | 9 | P00130 | 87.3 | 4e-38 |
X-RAY |
2017-06-14 | ILE | J:47 | J:46 | 116.0 | 0.663 | H | -52.4 | -47.9 | 76.0 | 0.434 | 0.229 |
D:P00125:0.229 |
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ILE | U:47 | W:46 | 117.0 | 0.669 | H | -52.5 | -47.8 | 75.0 | 0.429 | 0.24 |
O:P00125:0.24 |
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5okd | 10 | P00130 | 87.3 | 4e-38 |
X-RAY |
2018-02-28 | ILE | J:47 | J:46 | 111.0 | 0.634 | H | -58.2 | -31.4 | 71.0 | 0.406 | 0.228 |
D:P00125:0.229 |
HOH |
6.006 |
CA |
O |
|
6fo0 | 10 | P00130 | 87.3 | 4e-38 |
EM |
2018-02-28 | ILE | J:47 | W:46 | 120.0 | 0.686 | H | -70.2 | -26.9 | 82.0 | 0.469 | 0.217 |
D:P00125:0.217 |
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ILE | T:47 | J:46 | 119.0 | 0.68 | H | -70.3 | -26.8 | 81.0 | 0.463 | 0.217 |
N:P00125:0.217 |
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6fo2 | 10 | P00130 | 87.3 | 4e-38 |
EM |
2018-02-28 | ILE | J:47 | W:46 | 116.0 | 0.663 | H | -69.3 | -58.2 | 79.0 | 0.451 | 0.212 |
D:P00125:0.211 |
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ILE | T:47 | J:46 | 117.0 | 0.669 | H | -69.3 | -58.2 | 81.0 | 0.463 | 0.206 |
N:P00125:0.206 |
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6fo6 | 9 | P00130 | 87.3 | 4e-38 |
EM |
2018-02-28 | ILE | I:47 | J:46 | 121.0 | 0.691 | H | -68.3 | -48.2 | 76.0 | 0.434 | 0.257 |
E:P00125:0.257 |
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ILE | R:47 | W:46 | 122.0 | 0.697 | H | -68.3 | -48.1 | 78.0 | 0.446 | 0.251 |
N:P00125:0.251 |
||||||||||||
6q9e | 10 | W5P6B2 | 88.71 | 9e-38 |
EM |
2019-08-21 | ILE | J:46 | i1:46 | 108.0 | 0.617 | T | -93.5 | -5.4 | 72.0 | 0.411 | 0.206 |
D:W5Q0A9:0.206 |
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ILE | T:46 | i2:46 | 119.0 | 0.68 | T | -77.2 | -14.9 | 77.0 | 0.44 | 0.24 |
N:W5Q0A9:0.24 |
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6qbx | 10 | W5P6B2 | 88.71 | 9e-38 |
EM |
2019-08-21 | ILE | J:46 | i1:46 | 112.0 | 0.64 | T | -83.7 | -3.6 | 75.0 | 0.429 | 0.211 |
D:W5Q0A9:0.211 |
|||||
ILE | T:46 | i2:46 | 118.0 | 0.674 | H | -80.9 | -29.9 | 74.0 | 0.423 | 0.251 |
N:W5Q0A9:0.251 |
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6qc2 | 38 | W5P6B2 | 88.71 | 9e-38 |
EM |
2019-08-21 | ILE | LA:46 | i1:46 | 96.0 | 0.549 | T | -83.5 | -4.6 | 63.0 | 0.36 | 0.189 |
FA:W5Q0A9:0.189 |
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ILE | VA:46 | i2:46 | 128.0 | 0.731 | H | -80.8 | -10.6 | 89.0 | 0.509 | 0.222 |
PA:W5Q0A9:0.223 |
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6qc3 | 10 | W5P6B2 | 88.71 | 9e-38 |
EM |
2019-08-21 | ILE | J:46 | i1:46 | 101.0 | 0.577 | H | -81.8 | -9.3 | 69.0 | 0.394 | 0.183 |
D:W5Q0A9:0.183 |
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ILE | T:46 | i2:46 | 125.0 | 0.714 | T | -76.4 | -8.9 | 88.0 | 0.503 | 0.211 |
N:W5Q0A9:0.211 |
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6qc4 | 10 | W5P6B2 | 88.71 | 9e-38 |
EM |
2019-08-21 | ILE | J:46 | i1:46 | 105.0 | 0.6 | T | -88.4 | -1.4 | 70.0 | 0.4 | 0.2 |
D:W5Q0A9:0.2 |
|||||
ILE | T:46 | i2:46 | 128.0 | 0.731 | H | -81.1 | -29.7 | 92.0 | 0.526 | 0.205 |
N:W5Q0A9:0.206 |
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5gup | 52 | Q2EN79 | 87.3 | 1e-37 |
EM |
2017-03-29 | ILE | BB:47 | 1:47 | 117.0 | 0.669 | T | -66.2 | -83.5 | 74.0 | 0.423 | 0.246 |
XA:None:0.246 |
|||||
ILE | MB:47 | Ac:47 | 121.0 | 0.691 | H | -75.3 | -81.1 | 85.0 | 0.486 | 0.205 |
IB:None:0.206 |
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5klv | 10 | P00130 | 88.52 | 3e-37 |
X-RAY |
2016-10-12 | ILE | J:46 | J:46 | 124.0 | 0.709 | H | -60.8 | -51.5 | 89.0 | 0.509 | 0.2 |
D:P00125:0.2 |
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6nhg | 10 | P00130 | 88.52 | 3e-37 |
X-RAY |
2019-06-19 | ILE | J:46 | J:46 | 119.0 | 0.68 | H | -65.0 | -26.4 | 81.0 | 0.463 | 0.217 |
D:P00125:0.217 |
|||||
1be3 | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
1999-01-13 | ILE | J:46 | J:46 | 111.0 | 0.634 | H | -66.5 | -18.5 | 69.0 | 0.394 | 0.24 |
D:P00125:0.24 |
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1bgy | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
1999-01-06 | ILE | J:46 | J:46 | 112.0 | 0.64 | T | -52.2 | -18.7 | 68.0 | 0.389 | 0.251 |
D:P00125:0.251 |
|||||
ILE | U:46 | V:46 | 114.0 | 0.651 | T | -52.3 | -19.7 | 75.0 | 0.429 | 0.222 |
O:P00125:0.223 |
||||||||||||
1l0l | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
2003-04-08 | ILE | J:46 | J:46 | 128.0 | 0.731 | H | -85.4 | -20.0 | 91.0 | 0.52 | 0.211 |
D:P00125:0.211 |
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1l0n | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
2003-04-08 | ILE | J:46 | J:46 | 93.0 | 0.531 | -153.3 | 70.5 | 43.0 | 0.246 | 0.285 |
D:P00125:0.286 |
||||||
1ntk | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
2003-10-07 | ILE | J:46 | J:46 | 138.0 | 0.789 | T | -88.6 | -2.0 | 110.0 | 0.629 | 0.16 |
D:P00125:0.16 |
HOH |
6.129 |
O |
O |
|
1ntm | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
2003-10-07 | ILE | J:46 | J:46 | 138.0 | 0.789 | T | -80.4 | -7.6 | 110.0 | 0.629 | 0.16 |
D:P00125:0.16 |
HOH |
3.884 |
N |
O |
|
1ntz | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
2003-10-07 | ILE | J:46 | J:46 | 138.0 | 0.789 | T | -67.3 | -2.7 | 101.0 | 0.577 | 0.212 |
D:P00125:0.211 |
HOH |
8.619 |
CD1 |
O |
|
1nu1 | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
2003-10-07 | ILE | J:46 | J:46 | 140.0 | 0.8 | T | -83.0 | 12.2 | 98.0 | 0.56 | 0.24 |
D:P00125:0.24 |
|||||
1pp9 | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
2004-07-20 | ILE | J:46 | J:46 | 119.0 | 0.68 | H | -58.8 | -28.3 | 75.0 | 0.429 | 0.251 |
D:P00125:0.251 |
HOH |
3.037 |
O |
O |
|
ILE | T:46 | W:46 | 118.0 | 0.674 | H | -59.7 | -28.5 | 75.0 | 0.429 | 0.245 |
N:P00125:0.246 |
HOH |
3.040 |
O |
O |
||||||||
1ppj | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
2004-07-20 | ILE | J:46 | J:46 | 114.0 | 0.651 | H | -61.3 | -30.2 | 71.0 | 0.406 | 0.245 |
D:P00125:0.246 |
HOH |
4.673 |
CG2 |
O |
|
ILE | T:46 | W:46 | 116.0 | 0.663 | H | -61.3 | -30.4 | 72.0 | 0.411 | 0.252 |
N:P00125:0.251 |
HOH |
3.113 |
O |
O |
||||||||
1sqb | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
2004-09-07 | ILE | J:46 | J:46 | 121.0 | 0.691 | H | -79.3 | -15.7 | 80.0 | 0.457 | 0.234 |
D:P00125:0.234 |
HOH |
9.116 |
CG2 |
O |
|
1sqp | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
2005-11-01 | ILE | J:46 | J:46 | 125.0 | 0.714 | T | -81.0 | -15.8 | 75.0 | 0.429 | 0.285 |
D:P00125:0.286 |
|||||
1sqq | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
2005-10-25 | ILE | J:46 | J:46 | 139.0 | 0.794 | S | -97.6 | 20.4 | 128.0 | 0.731 | 0.063 |
D:P00125:0.063 |
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1sqv | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
2005-09-06 | ILE | J:46 | J:46 | 118.0 | 0.674 | T | -87.2 | -1.1 | 76.0 | 0.434 | 0.24 |
D:P00125:0.24 |
HOH |
4.623 |
CD1 |
O |
|
1sqx | 11 | P00130 | 88.52 | 4e-37 |
X-RAY |
2005-09-06 | ILE | K:46 | J:46 | 129.0 | 0.737 | S | -74.1 | -14.5 | 106.0 | 0.606 | 0.131 |
E:P00125:0.131 |
HOH |
5.388 |
O |
O |
|
2a06 | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
2005-06-21 | ILE | J:46 | J:46 | 113.0 | 0.646 | H | -61.1 | -30.8 | 70.0 | 0.4 | 0.246 |
D:P00125:0.246 |
HOH |
2.814 |
O |
O |
|
ILE | T:46 | W:46 | 115.0 | 0.657 | H | -58.1 | -32.1 | 71.0 | 0.406 | 0.251 |
N:P00125:0.251 |
HOH |
3.165 |
O |
O |
||||||||
2fyu | 10 | P00130 | 88.52 | 4e-37 |
X-RAY |
2006-08-29 | ILE | J:46 | J:46 | 127.0 | 0.726 | H | -67.8 | -30.8 | 86.0 | 0.491 | 0.235 |
D:P00125:0.234 |
HOH |
6.065 |
O |
O |
|
2ybb | 18 | P00130 | 88.52 | 4e-37 |
EM |
2011-10-19 | ILE | R:46 | J:46 | 118.0 | 0.674 | H | -58.7 | -28.4 | 74.0 | 0.423 | 0.251 |
L:P00125:0.251 |
HOH |
3.037 |
O |
O |
|
ILE | QA:46 | j:46 | 119.0 | 0.68 | H | -59.7 | -28.4 | 74.0 | 0.423 | 0.257 |
KA:P00125:0.257 |
HOH |
3.039 |
O |
O |
||||||||
5gpn | 10 | P00130 | 88.52 | 4e-37 |
EM |
2017-04-05 | ILE | J:46 | J:46 | 96.0 | NA | T | -52.1 | -18.7 | 73.0 | NA | NA |
D:P00125:NA |
|||||
ILE | L:46 | L:46 | 95.0 | NA | T | -52.2 | -19.9 | 60.0 | NA | NA |
P:P00125:NA |
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5luf | 10 | P00130 | 88.52 | 4e-37 |
EM |
2016-11-30 | ILE | J:46 | j:46 | 111.0 | 0.634 | T | -52.2 | -18.7 | 67.0 | 0.383 | 0.251 |
D:P00125:0.251 |
|||||
ILE | U:46 | v:46 | 114.0 | 0.651 | T | -52.3 | -19.8 | 75.0 | 0.429 | 0.222 |
O:P00125:0.223 |
||||||||||||
1bcc | 10 | P00130 | 86.89 | 2e-36 |
X-RAY |
1998-08-19 | ILE | J:46 | J:46 | 119.0 | 0.68 | T | -70.3 | -2.5 | 86.0 | 0.491 | 0.189 |
D:P00125:0.189 |
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2bcc | 10 | ? | 86.89 | 2e-36 |
X-RAY |
1999-08-02 | ILE | J:46 | J:46 | 114.0 | 0.651 | T | -60.6 | 0.8 | 81.0 | 0.463 | 0.188 |
D:None:0.189 |
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3bcc | 10 | P00130 | 86.89 | 2e-36 |
X-RAY |
1998-08-19 | ILE | J:46 | J:46 | 114.0 | 0.651 | T | -73.8 | 3.9 | 82.0 | 0.469 | 0.182 |
D:P00125:0.183 |
|||||
5j4z | 60 | W5P6B2 | 88.33 | 5e-36 |
EM |
2016-09-21 | ILE | LB:46 | AJ:46 | 80.0 | NA | H | -61.8 | -45.3 | 80.0 | NA | NA | ||||||
ILE | WB:46 | AU:46 | 81.0 | NA | H | -61.7 | -45.5 | 81.0 | NA | NA | |||||||||||||
5j7y | 60 | W5P6B2 | 88.33 | 5e-36 |
EM |
2016-09-21 | ILE | LB:46 | AJ:46 | 81.0 | NA | H | -61.8 | -45.4 | 81.0 | NA | NA | ||||||
ILE | WB:46 | AU:46 | 81.0 | NA | H | -61.7 | -45.5 | 81.0 | NA | NA | |||||||||||||
5j8k | 60 | W5P6B2 | 88.33 | 5e-36 |
EM |
2016-09-21 | ILE | LB:46 | AJ:46 | 80.0 | NA | H | -61.8 | -45.3 | 80.0 | NA | NA | ||||||
ILE | WB:46 | AU:46 | 81.0 | NA | H | -61.8 | -45.4 | 81.0 | NA | NA | |||||||||||||
7o37 | 9 | Q8R1I1 | 83.87 | 7e-36 |
EM |
2021-10-13 | ILE | I:46 | J:46 | 120.0 | 0.686 | H | -69.7 | -44.7 | 84.0 | 0.48 | 0.206 |
D:Q9D0M3:0.206 |
|||||
ILE | S:46 | U:46 | 115.0 | 0.657 | H | -70.7 | -33.4 | 67.0 | 0.383 | 0.274 |
N:Q9D0M3:0.274 |
||||||||||||
7o3c | 9 | Q8R1I1 | 83.87 | 7e-36 |
EM |
2021-10-13 | ILE | I:46 | J:46 | 117.0 | 0.669 | H | -64.9 | -31.3 | 53.0 | 0.303 | 0.366 |
D:Q9D0M3:0.274 CA:P43023:0.091 |
|||||
ILE | S:46 | U:46 | 115.0 | 0.657 | H | -80.5 | -24.7 | 76.0 | 0.434 | 0.223 |
N:Q9D0M3:0.223 |
||||||||||||
7o3e | 23 | Q8R1I1 | 83.87 | 7e-36 |
EM |
2021-10-13 | ILE | CA:46 | J:46 | 122.0 | 0.697 | H | -74.6 | -26.4 | 94.0 | 0.537 | 0.16 |
D:Q9D0M3:0.16 |
|||||
ILE | DA:46 | U:46 | 122.0 | 0.697 | H | -69.3 | -38.0 | 88.0 | 0.503 | 0.194 |
EA:Q9D0M3:0.194 |
||||||||||||
7o3h | 9 | Q8R1I1 | 83.87 | 7e-36 |
EM |
2021-10-13 | ILE | I:46 | J:46 | 109.0 | 0.623 | H | -71.6 | -39.7 | 66.0 | 0.377 | 0.246 |
D:Q9D0M3:0.246 |
|||||
ILE | S:46 | U:46 | 119.0 | 0.68 | H | -66.5 | -37.0 | 81.0 | 0.463 | 0.217 |
N:Q9D0M3:0.217 |
||||||||||||
6haw | 10 | P00130 | 88.14 | 2e-35 |
X-RAY |
2019-01-16 | ILE | J:45 | J:46 | 114.0 | 0.651 | H | -58.6 | -32.8 | 75.0 | 0.429 | 0.222 |
D:P00125:0.223 |
|||||
6xvf | 10 | P00130 | 88.14 | 2e-35 |
X-RAY |
2020-07-22 | ILE | J:45 | J:46 | 115.0 | 0.657 | H | -58.9 | -31.1 | 74.0 | 0.423 | 0.234 |
D:P00125:0.234 |
|||||
6zfs | 10 | P00130 | 88.14 | 2e-35 |
X-RAY |
2021-06-30 | ILE | J:45 | J:46 | 110.0 | 0.629 | H | -59.5 | -30.5 | 71.0 | 0.406 | 0.223 |
D:P00125:0.223 |
|||||
6zft | 10 | P00130 | 88.14 | 2e-35 |
X-RAY |
2021-06-30 | ILE | J:45 | J:46 | 113.0 | 0.646 | H | -55.1 | -34.0 | 71.0 | 0.406 | 0.24 |
D:P00125:0.24 |
|||||
6zfu | 10 | P00130 | 88.14 | 2e-35 |
X-RAY |
2021-06-30 | ILE | J:45 | J:46 | 120.0 | 0.686 | H | -58.9 | -30.9 | 88.0 | 0.503 | 0.183 |
D:P00125:0.183 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q9udw1-f1 | 1 | Q9UDW1 | 100.0 | 2e-42 | ILE | A:47 | A:47 | 113.0 | 0.646 | H | -62.6 | -34.1 |