Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr22 | 24313802 | . | G | A | CCDS13820.1:NM_001084392.1:c.295Cgc>Tgc_NP_001077861.1:p.99R>C | Homo sapiens D-dopachrome tautomerase (DDT), transcript variant 1, mRNA. |
|---|---|---|---|---|---|---|---|
|
|
|
|
|
PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 1dpt | 1 | P30046 | 100.0 | 3e-83 |
X-RAY |
1999-03-30 | ARG | A:98 | A:98 | 124.0 | 0.551 | E | -122.6 | 135.5 | 124.0 | 0.551 | 0.0 |
HOH |
2.914 |
NE |
O |
||
| ARG | B:98 | B:98 | 122.0 | 0.542 | E | -126.5 | 135.0 | NA | NA | NA | |||||||||||||
| ARG | C:98 | C:98 | 121.0 | 0.538 | E | -124.7 | 137.0 | NA | NA | NA | |||||||||||||
| 3kan | 1 | Q53Y51 | 100.0 | 3e-83 |
X-RAY |
2011-04-20 | ARG | A:98 | A:98 | 120.0 | 0.533 | E | -121.6 | 138.3 | 5.0 | 0.022 | 0.511 |
A:Q53Y51:0.511 |
RW1 CL HOH |
7.461 9.357 2.825 |
CD CD NE |
N3 CL O |
|
| ARG | B:98 | B:98 | 120.0 | 0.533 | E | -120.4 | 139.7 | NA | NA | NA | |||||||||||||
| ARG | C:98 | C:98 | 123.0 | 0.547 | E | -121.2 | 137.0 | NA | NA | NA | |||||||||||||
| 4q3f | 1 | P30046 | 100.0 | 3e-83 |
X-RAY |
2014-06-04 | ARG | A:98 | A:98 | 123.0 | 0.547 | E | -123.9 | 139.6 | 7.0 | 0.031 | 0.516 |
A:P30046:0.516 |
TLA HOH |
7.144 2.813 |
CD NE |
O3 O |
|
| ARG | B:98 | B:98 | 126.0 | 0.56 | E | -120.4 | 138.8 | NA | NA | NA | |||||||||||||
| ARG | C:98 | C:98 | 125.0 | 0.556 | E | -122.1 | 139.3 | NA | NA | NA | |||||||||||||
| 6c5f | 1 | P30046 | 100.0 | 3e-83 |
X-RAY |
2018-06-13 | ARG | A:98 | A:98 | 127.0 | 0.564 | E | -130.7 | 132.2 | 8.0 | 0.036 | 0.528 |
A:P30046:0.529 |
HOH |
2.846 |
NE |
O |
|
| ARG | B:98 | B:98 | 137.0 | 0.609 | E | -131.0 | 132.4 | NA | NA | NA | |||||||||||||
| ARG | C:98 | C:98 | 126.0 | 0.56 | E | -130.1 | 133.4 | NA | NA | NA | |||||||||||||
| 7mse | 1 | P30046 | 100.0 | 3e-83 |
X-RAY |
2021-08-18 | ARG | A:98 | A:98 | 121.0 | 0.538 | E | -124.7 | 139.9 | 9.0 | 0.04 | 0.498 |
A:P30046:0.498 |
TLA HOH |
7.324 2.756 |
CD NE |
O3 O |
|
| ARG | B:98 | B:98 | 123.0 | 0.547 | E | -122.6 | 138.8 | NA | NA | NA | |||||||||||||
| ARG | C:98 | C:98 | 126.0 | 0.56 | E | -124.1 | 137.2 | NA | NA | NA | |||||||||||||
| 7mw7 | 1 | P30046 | 99.15 | 9e-83 |
X-RAY |
2021-08-18 | ARG | A:99 | A:98 | 124.0 | 0.551 | E | -120.1 | 137.0 | 6.0 | 0.027 | 0.524 |
A:P30046:0.524 |
SO4 NA SO4 NA SO4 NA HOH |
6.266 8.052 6.309 7.824 6.306 3.864 2.051 |
HH11 HH12 HH11 HH12 HH11 HH12 HE |
O2 NA O3 NA O1 NA O |
|
| 7mru | 1 | P30046 | 99.15 | 1e-82 |
X-RAY |
2021-08-18 | ARG | A:98 | A:98 | 108.0 | 0.48 | E | -121.5 | 138.5 | 12.0 | 0.053 | 0.427 |
C:P30046:0.427 |
TRS HOH |
4.293 2.686 |
NH1 NE |
O3 O |
|
| ARG | B:98 | B:98 | 111.0 | 0.493 | E | -122.9 | 138.9 | 11.0 | 0.049 | 0.444 |
A:P30046:0.444 |
TRS HOH |
3.696 2.718 |
NH1 NE |
HO1 O |
||||||||
| ARG | C:98 | C:98 | 116.0 | 0.516 | E | -123.3 | 135.5 | 14.0 | 0.062 | 0.454 |
B:P30046:0.453 |
TRS HOH |
4.150 2.716 |
NH1 NE |
HO2 O |
||||||||
| 7mrv | 1 | P30046 | 99.15 | 6e-82 |
X-RAY |
2021-08-18 | ARG | A:98 | A:98 | 104.0 | 0.462 | E | -125.3 | 149.9 | 10.0 | 0.044 | 0.418 |
A:P30046:0.418 |
SO4 HOH |
8.026 2.807 |
CB NE |
O4 O |
|
AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p30046-f1 | 1 | P30046 | 100.0 | 2e-84 | ARG | A:99 | A:99 | 120.0 | 0.533 | E | -116.3 | 135.8 | |