Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr22 29737551 . T A CCDS13855.1:NM_001127.3:c.1735Agt>Tgt_NP_001118.3:p.579S>C Homo sapiens adaptor related protein complex 1 beta 1 subunit (AP1B1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6yaf 2 P63010 83.49 0.0 EM
 2020-07-29 ASN B:586 B:579 126.0 0.787 T -63.2 -36.2 117.0 0.731 0.056 C:P84092:0.056
6yah 2 P63010 83.49 0.0 EM
 2020-07-29 ASN B:586 B:579 124.0 0.775 T -63.2 -36.1 115.0 0.719 0.056 C:P84092:0.056
6cm9 2 Q10567 99.66 0.0 EM
 2018-08-08 SER C:581 B:579 93.0 0.809 T -114.7 -19.8 93.0 0.809 0.0
6d83 2 Q10567 99.66 0.0 EM
 2018-08-08 SER C:581 B:579 103.0 0.896 T -98.1 -1.1 103.0 0.896 0.0
6d84 2 Q10567 99.66 0.0 EM
 2018-08-08 SER C:581 B:579 100.0 0.87 G -70.0 -12.3 100.0 0.87 0.0
SER K:581 F:579 100.0 0.87 G -70.0 -12.2 100.0 0.87 0.0
6dff 2 Q10567 99.66 0.0 EM
 2018-08-08 SER C:581 B:579 100.0 0.87 T -110.3 -14.9 100.0 0.87 0.0
4p6z 4 Q10567 99.66 0.0 X-RAY
 2014-05-21 SER D:595 B:579 113.0 0.983 G -54.2 -19.6 113.0 0.983 0.0 HOH
 7.792
 N
 O
4hmy 2 Q10567 99.49 0.0 X-RAY
 2013-03-06 SER B:581 NA:NA DO NA DO DO DO NA NA NA
4uqi 2 P63010 89.6 0.0 X-RAY
 2014-07-30 ASN B:579 B:579 136.0 0.85 H -47.6 -26.3 129.0 0.806 0.044 C:P84092:0.044
6cri 2 Q10567 99.65 0.0 EM
 2018-08-01 SER B:566 B:579 92.0 0.8 T -87.8 -19.6 92.0 0.8 0.0
SER J:566 I:579 93.0 0.809 T -87.8 -19.6 93.0 0.809 0.0
SER R:566 J:579 92.0 0.8 T -87.8 -19.6 92.0 0.8 0.0
2xa7 2 P63010 93.06 0.0 X-RAY
 2010-07-21 ASN B:579 B:579 126.0 0.787 G -82.9 -3.5 91.0 0.569 0.218 C:P84092:0.062
A:Q66HM2:0.156
6qh5 2 P63010 93.06 0.0 X-RAY
 2019-09-04 ASN B:579 B:579 126.0 0.787 G -54.9 -27.0 115.0 0.719 0.068 C:P84092:0.069
6qh6 2 P63010 93.06 0.0 X-RAY
 2019-09-04 ASN B:579 B:579 125.0 0.781 G -68.4 -5.4 71.0 0.444 0.337 D:P84092:0.037
A:Q66HM2:0.294
6qh7 2 P63010 93.06 0.0 X-RAY
 2019-09-04 ASN B:579 B:579 133.0 0.831 G -73.3 -9.1 107.0 0.669 0.162 D:Q3ZC13:0.037
A:Q66HM2:0.125
2jkr 2 P63010 93.06 0.0 X-RAY
 2008-10-28 ASN B:579 B:579 138.0 0.863 G -64.9 -14.1 137.0 0.856 0.007 F:P84092:0.006
ASN C:579 E:579 142.0 0.887 G -66.5 -14.0 NA NA NA
2jkt 2 P63010 93.06 0.0 X-RAY
 2008-10-28 ASN B:579 B:579 141.0 0.881 G -76.7 -11.6 140.0 0.875 0.006 F:P84092:0.006
ASN C:579 E:579 142.0 0.887 G -77.2 -12.5 NA NA NA
2vgl 2 P63010 93.06 0.0 X-RAY
 2007-12-25 ASN B:579 B:579 119.0 0.744 G -72.5 -12.0 119.0 0.744 0.0
6owo 2 Q9DBG3 93.06 0.0 EM
 2019-09-11 ASN B:579 B:579 150.0 0.938 G -69.5 -21.4 150.0 0.938 0.0
6owt 2 P62944 93.06 0.0 EM
 2019-09-25 ASN B:579 B:579 138.0 0.863 G -88.2 16.6 109.0 0.681 0.182 A:Q66HM2:0.131
C:Q5FWI9:0.05
6oxl 2 Q9DBG3 93.06 0.0 EM
 2019-09-11 ASN B:579 B:579 167.0 1.0 G -79.6 -6.7 157.0 0.981 0.019 C:P84091:0.062
6yae 2 P63010 93.06 0.0 EM
 2020-07-29 ASN B:579 B:579 135.0 0.844 G -67.5 -29.0 135.0 0.844 0.0
1w63 2 P52303 97.77 0.0 X-RAY
 2004-09-21 ASN B:579 B:579 151.0 0.944 H -62.9 -26.0 151.0 0.944 0.0
ASN D:579 D:579 152.0 0.95 H -62.9 -26.0 NA NA NA
ASN F:579 F:579 150.0 0.938 H -62.9 -26.0 NA NA NA
ASN H:579 H:579 153.0 0.956 H -62.8 -26.0 NA NA NA
ASN J:579 J:579 150.0 0.938 H -62.9 -26.0 NA NA NA
ASN L:579 L:579 150.0 0.938 H -62.9 -26.0 NA NA NA
6uri 4 P63010 92.55 0.0 X-RAY
 2020-07-29 ASN D:603 B:579 157.0 0.981 T -77.2 -31.4 75.0 0.469 0.512 A:Q66HM2:0.512

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q10567-f1 1 Q10567 99.89 0.0 SER A:579 A:579 54.0 0.47 G -60.1 -20.6
af-p63010-f1 1 P63010 83.49 0.0 ASN A:579 A:579 75.0 0.469 G -62.1 -18.4