Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr22 29737590 . A C CCDS13855.1:NM_001127.3:c.1696Tac>Gac_NP_001118.3:p.566Y>D Homo sapiens adaptor related protein complex 1 beta 1 subunit (AP1B1), transcript variant 1, mRNA.
pdb_id: 
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label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6yaf 2 P63010 83.49 0.0 EM
 2020-07-29 HIS B:573 B:566 45.0 0.231 G -130.0 -2.1 30.0 0.154 0.077 C:P84092:0.077
6yah 2 P63010 83.49 0.0 EM
 2020-07-29 HIS B:573 B:566 46.0 0.236 G -129.9 -2.1 30.0 0.154 0.082 C:P84092:0.082
6cm9 2 Q10567 99.66 0.0 EM
 2018-08-08 TYR C:568 B:566 61.0 0.265 S -118.6 82.7 51.0 0.222 0.043 G:P35585:0.043
6d83 2 Q10567 99.66 0.0 EM
 2018-08-08 TYR C:568 B:566 71.0 0.309 S -118.8 86.2 63.0 0.274 0.035 G:P35585:0.035
6d84 2 Q10567 99.66 0.0 EM
 2018-08-08 TYR C:568 B:566 65.0 0.283 -126.9 91.9 59.0 0.257 0.026 G:P35585:0.026
TYR K:568 F:566 66.0 0.287 -127.0 91.8 59.0 0.257 0.03 O:P35585:0.03
6dff 2 Q10567 99.66 0.0 EM
 2018-08-08 TYR C:568 B:566 63.0 0.274 S -118.9 83.9 56.0 0.243 0.031 G:P35585:0.03
4p6z 4 Q10567 99.66 0.0 X-RAY
 2014-05-21 TYR D:582 B:566 79.0 0.343 T -107.2 19.6 73.0 0.317 0.026 C:P35585:0.026
 HOH
 3.636
 CE1
 O
4hmy 2 Q10567 99.49 0.0 X-RAY
 2013-03-06 TYR B:568 B:566 68.0 0.296 G -174.6 84.3 64.0 0.278 0.018 C:P35585:0.017
4uqi 2 P63010 89.6 0.0 X-RAY
 2014-07-30 HIS B:566 B:566 57.0 0.292 T -108.3 18.2 49.0 0.251 0.041 C:P84092:0.041
6cri 2 Q10567 99.65 0.0 EM
 2018-08-01 TYR B:553 B:566 66.0 0.287 -117.8 86.7 59.0 0.257 0.03 F:P35585:0.03
TYR J:553 I:566 65.0 0.283 -117.8 86.6 59.0 0.257 0.026 N:P35585:0.026
TYR R:553 J:566 66.0 0.287 -117.8 86.6 59.0 0.257 0.03 V:P35585:0.03
2xa7 2 P63010 93.06 0.0 X-RAY
 2010-07-21 HIS B:566 B:566 54.0 0.277 T -121.2 60.6 47.0 0.241 0.036 C:P84092:0.036
6qh5 2 P63010 93.06 0.0 X-RAY
 2019-09-04 HIS B:566 B:566 53.0 0.272 T -148.4 11.3 48.0 0.246 0.026 C:P84092:0.026
6qh6 2 P63010 93.06 0.0 X-RAY
 2019-09-04 HIS B:566 B:566 56.0 0.287 T -105.1 26.3 47.0 0.241 0.046 D:P84092:0.046
6qh7 2 P63010 93.06 0.0 X-RAY
 2019-09-04 HIS B:566 B:566 56.0 0.287 T -96.8 27.5 50.0 0.256 0.031 D:Q3ZC13:0.031
2jkr 2 P63010 93.06 0.0 X-RAY
 2008-10-28 HIS B:566 B:566 65.0 0.333 T -105.9 16.8 58.0 0.297 0.036 F:P84092:0.036
HIS C:566 E:566 63.0 0.323 T -103.8 16.9 NA NA NA
2jkt 2 P63010 93.06 0.0 X-RAY
 2008-10-28 HIS B:566 B:566 67.0 0.344 T -96.5 27.3 60.0 0.308 0.036 F:P84092:0.036
HIS C:566 E:566 67.0 0.344 T -97.8 28.4 NA NA NA
2vgl 2 P63010 93.06 0.0 X-RAY
 2007-12-25 HIS B:566 B:566 59.0 0.303 T -108.6 15.9 48.0 0.246 0.057 C:P84092:0.056
6owo 2 Q9DBG3 93.06 0.0 EM
 2019-09-11 HIS B:566 B:566 65.0 0.333 T -132.0 48.4 59.0 0.303 0.03 C:P84091:0.031
6owt 2 P62944 93.06 0.0 EM
 2019-09-25 HIS B:566 B:566 67.0 0.344 T -110.6 41.8 62.0 0.318 0.026 C:Q5FWI9:0.026
6oxl 2 Q9DBG3 93.06 0.0 EM
 2019-09-11 HIS B:566 B:566 50.0 0.256 G -119.3 46.0 42.0 0.215 0.041 C:P84091:0.041
6yae 2 P63010 93.06 0.0 EM
 2020-07-29 HIS B:566 B:566 64.0 0.328 T -116.0 46.7 54.0 0.277 0.051 C:P84092:0.051
1w63 2 P52303 97.77 0.0 X-RAY
 2004-09-21 TYR B:566 B:566 85.0 0.37 T -87.2 33.8 82.0 0.357 0.013 M:P35585:0.013
TYR D:566 D:566 84.0 0.365 T -87.2 33.8 NA NA NA
TYR F:566 F:566 85.0 0.37 T -87.2 33.8 NA NA NA
TYR H:566 H:566 84.0 0.365 T -87.3 33.8 NA NA NA
TYR J:566 J:566 84.0 0.365 T -87.3 33.8 NA NA NA
TYR L:566 L:566 85.0 0.37 T -87.2 33.8 NA NA NA
6uri 4 P63010 92.55 0.0 X-RAY
 2020-07-29 HIS D:590 B:566 59.0 0.303 T -129.4 25.5 49.0 0.251 0.052 E:Q96CW1:0.051

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q10567-f1 1 Q10567 99.89 0.0 TYR A:566 A:566 30.0 0.13 T -113.8 17.1
af-p63010-f1 1 P63010 83.49 0.0 HIS A:566 A:566 30.0 0.154 T -118.6 18.6