Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr22 29737633 . C A CCDS13855.1:NM_001127.3:c.1653gaG>gaT_NP_001118.3:p.551E>D Homo sapiens adaptor related protein complex 1 beta 1 subunit (AP1B1), transcript variant 1, mRNA.
pdb_id: 
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label_seq_id: 
label_comp_id: 
auth_asym_id: 
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alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6yaf 2 P63010 83.49 0.0 EM
 2020-07-29 GLU B:558 B:551 66.0 0.347 -73.8 -59.4 25.0 0.132 0.215 A:P18484:0.216
6yah 2 P63010 83.49 0.0 EM
 2020-07-29 GLU B:558 B:551 68.0 0.358 -73.9 -59.3 25.0 0.132 0.226 A:P18484:0.226
6cm9 2 Q10567 99.66 0.0 EM
 2018-08-08 GLU C:553 B:551 155.0 0.816 -76.7 97.7 114.0 0.6 0.216 E:P22892:0.216
6d83 2 Q10567 99.66 0.0 EM
 2018-08-08 GLU C:553 B:551 153.0 0.805 -92.1 89.2 118.0 0.621 0.184 E:P22892:0.184
6d84 2 Q10567 99.66 0.0 EM
 2018-08-08 GLU C:553 B:551 152.0 0.8 -89.1 90.3 110.0 0.579 0.221 E:P22892:0.221
GLU K:553 F:551 155.0 0.816 -89.1 90.3 114.0 0.6 0.216 M:P22892:0.216
6dff 2 Q10567 99.66 0.0 EM
 2018-08-08 GLU C:553 B:551 152.0 0.8 -88.7 109.8 116.0 0.611 0.189 E:P22892:0.189
4p6z 4 Q10567 99.66 0.0 X-RAY
 2014-05-21 GLU D:567 B:551 185.0 0.974 -70.6 129.8 174.0 0.916 0.058 A:P22892:0.058
4hmy 2 Q10567 99.49 0.0 X-RAY
 2013-03-06 GLU B:553 B:551 29.0 0.153 -80.4 -47.4 12.0 0.063 0.09 A:P22892:0.089
4uqi 2 P63010 89.6 0.0 X-RAY
 2014-07-30 GLU B:551 B:551 74.0 NA -92.8 7.1 74.0 NA NA
6cri 2 Q10567 99.65 0.0 EM
 2018-08-01 GLU B:538 B:551 157.0 0.826 -80.5 98.6 119.0 0.626 0.2 D:P22892:0.2
GLU J:538 I:551 158.0 0.832 -80.5 98.6 120.0 0.632 0.2 L:P22892:0.2
GLU R:538 J:551 156.0 0.821 -80.6 98.6 118.0 0.621 0.2 T:P22892:0.2
2xa7 2 P63010 93.06 0.0 X-RAY
 2010-07-21 GLU B:551 B:551 30.0 0.158 -137.7 -27.2 25.0 0.132 0.026 A:Q66HM2:0.026
6qh5 2 P63010 93.06 0.0 X-RAY
 2019-09-04 GLU B:551 B:551 65.0 NA -92.5 -8.0 65.0 NA NA
6qh6 2 P63010 93.06 0.0 X-RAY
 2019-09-04 GLU B:551 B:551 111.0 0.584 -66.6 -57.0 41.0 0.216 0.368 A:Q66HM2:0.368
6qh7 2 P63010 93.06 0.0 X-RAY
 2019-09-04 GLU B:551 B:551 111.0 0.584 -72.3 -52.0 49.0 0.258 0.326 A:Q66HM2:0.326
2jkr 2 P63010 93.06 0.0 X-RAY
 2008-10-28 GLU B:551 B:551 138.0 0.726 -136.9 -119.0 118.0 0.621 0.105 A:P17427:0.105
 SO4
 9.467
 OE1
 O3
GLU C:551 E:551 142.0 0.747 -137.6 -120.4 NA NA NA
2jkt 2 P63010 93.06 0.0 X-RAY
 2008-10-28 GLU B:551 B:551 135.0 0.711 -130.0 -128.6 113.0 0.595 0.116 A:P17427:0.116
 SO4
 9.548
 OE1
 O3
GLU C:551 E:551 135.0 0.711 -130.7 -129.7 NA NA NA
2vgl 2 P63010 93.06 0.0 X-RAY
 2007-12-25 GLU B:551 B:551 83.0 NA -66.8 -44.8 60.0 NA NA A:Q66HM2:NA
6owo 2 Q9DBG3 93.06 0.0 EM
 2019-09-11 GLU B:551 NA:NA DO NA DO DO DO NA NA NA
6owt 2 P62944 93.06 0.0 EM
 2019-09-25 GLU B:551 B:551 58.0 0.305 -72.6 113.3 58.0 0.305 0.0
6oxl 2 Q9DBG3 93.06 0.0 EM
 2019-09-11 GLU B:551 NA:NA DO NA DO DO DO NA NA NA
6yae 2 P63010 93.06 0.0 EM
 2020-07-29 GLU B:551 B:551 97.0 NA T -66.4 -14.0 97.0 NA NA
1w63 2 P52303 97.77 0.0 X-RAY
 2004-09-21 GLU B:551 B:551 169.0 0.889 T -85.0 -11.4 169.0 0.889 0.0
GLU D:551 D:551 169.0 0.889 T -85.0 -11.4 NA NA NA
GLU F:551 F:551 169.0 0.889 T -84.9 -11.4 NA NA NA
GLU H:551 H:551 171.0 0.9 T -85.0 -11.4 NA NA NA
GLU J:551 J:551 172.0 0.905 T -85.0 -11.3 NA NA NA
GLU L:551 L:551 172.0 0.905 T -85.0 -11.4 NA NA NA
6uri 4 P63010 92.55 0.0 X-RAY
 2020-07-29 GLU D:575 B:551 47.0 0.247 -52.8 110.0 47.0 0.247 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q10567-f1 1 Q10567 99.89 0.0 GLU A:551 A:551 143.0 0.753 G -62.4 -21.2
af-p63010-f1 1 P63010 83.49 0.0 GLU A:551 A:551 148.0 0.779 G -61.7 -16.3