Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr22 | 29745344 | . | C | A | CCDS13855.1:NM_001127.3:c.1300Gag>Tag_NP_001118.3:p.434E>* | Homo sapiens adaptor related protein complex 1 beta 1 subunit (AP1B1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6yaf | 2 | P63010 | 83.49 | 0.0 |
EM |
2020-07-29 | GLU | B:441 | B:434 | 118.0 | 0.621 | H | -59.6 | -37.4 | 118.0 | 0.621 | 0.0 | ||||||
6yah | 2 | P63010 | 83.49 | 0.0 |
EM |
2020-07-29 | GLU | B:441 | B:434 | 121.0 | 0.637 | H | -59.6 | -37.4 | 121.0 | 0.637 | 0.0 | ||||||
6cm9 | 2 | Q10567 | 99.66 | 0.0 |
EM |
2018-08-08 | GLU | C:436 | B:434 | 125.0 | 0.658 | S | -113.8 | 80.8 | 125.0 | 0.658 | 0.0 | ||||||
6d83 | 2 | Q10567 | 99.66 | 0.0 |
EM |
2018-08-08 | GLU | C:436 | B:434 | 125.0 | 0.658 | S | -95.6 | 92.4 | 125.0 | 0.658 | 0.0 | ||||||
6d84 | 2 | Q10567 | 99.66 | 0.0 |
EM |
2018-08-08 | GLU | C:436 | B:434 | 112.0 | 0.589 | S | -95.8 | 98.9 | 112.0 | 0.589 | 0.0 | ||||||
GLU | K:436 | F:434 | 111.0 | 0.584 | S | -95.8 | 99.0 | 111.0 | 0.584 | 0.0 | |||||||||||||
6dff | 2 | Q10567 | 99.66 | 0.0 |
EM |
2018-08-08 | GLU | C:436 | B:434 | 143.0 | 0.753 | S | -126.3 | 85.9 | 143.0 | 0.753 | 0.0 | ||||||
4p6z | 4 | Q10567 | 99.66 | 0.0 |
X-RAY |
2014-05-21 | GLU | D:450 | B:434 | 154.0 | 0.811 | G | -71.6 | -13.8 | 154.0 | 0.811 | 0.0 | ||||||
4hmy | 2 | Q10567 | 99.49 | 0.0 |
X-RAY |
2013-03-06 | GLU | B:436 | B:434 | 130.0 | 0.684 | T | -59.0 | -17.3 | 130.0 | 0.684 | 0.0 | ||||||
4uqi | 2 | P63010 | 89.6 | 0.0 |
X-RAY |
2014-07-30 | GLU | B:434 | B:434 | 145.0 | 0.763 | T | -52.4 | -20.4 | 145.0 | 0.763 | 0.0 | ||||||
6cri | 2 | Q10567 | 99.65 | 0.0 |
EM |
2018-08-01 | GLU | B:421 | B:434 | 130.0 | 0.684 | S | -107.6 | 94.2 | 130.0 | 0.684 | 0.0 | ||||||
GLU | J:421 | I:434 | 131.0 | 0.689 | S | -107.6 | 94.2 | 131.0 | 0.689 | 0.0 | |||||||||||||
GLU | R:421 | J:434 | 129.0 | 0.679 | S | -107.6 | 94.2 | 129.0 | 0.679 | 0.0 | |||||||||||||
2xa7 | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2010-07-21 | GLU | B:434 | B:434 | 123.0 | 0.647 | H | -55.3 | -65.2 | 123.0 | 0.647 | 0.0 | ||||||
6qh5 | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2019-09-04 | GLU | B:434 | B:434 | 141.0 | 0.742 | T | -44.8 | -34.9 | 141.0 | 0.742 | 0.0 | ||||||
6qh6 | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2019-09-04 | GLU | B:434 | B:434 | 135.0 | 0.711 | H | -56.9 | -44.8 | 135.0 | 0.711 | 0.0 | ||||||
6qh7 | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2019-09-04 | GLU | B:434 | B:434 | 132.0 | 0.695 | H | -50.7 | -48.2 | 132.0 | 0.695 | 0.0 | ||||||
2jkr | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2008-10-28 | GLU | B:434 | B:434 | 84.0 | 0.442 | T | -100.8 | -15.9 | 84.0 | 0.442 | 0.0 | ||||||
GLU | C:434 | E:434 | 82.0 | 0.432 | T | -100.9 | -16.1 | NA | NA | NA | |||||||||||||
2jkt | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2008-10-28 | GLU | B:434 | B:434 | 86.0 | 0.453 | T | -121.0 | -12.5 | 86.0 | 0.453 | 0.0 | ||||||
GLU | C:434 | E:434 | 85.0 | 0.447 | T | -125.1 | -13.1 | NA | NA | NA | |||||||||||||
2vgl | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2007-12-25 | GLU | B:434 | B:434 | 136.0 | 0.716 | H | -52.6 | -50.3 | 136.0 | 0.716 | 0.0 | ||||||
6owo | 2 | Q9DBG3 | 93.06 | 0.0 |
EM |
2019-09-11 | GLU | B:434 | B:434 | 103.0 | 0.542 | T | -84.4 | 4.2 | 103.0 | 0.542 | 0.0 | ||||||
6owt | 2 | P62944 | 93.06 | 0.0 |
EM |
2019-09-25 | GLU | B:434 | B:434 | 76.0 | NA | H | -75.0 | -21.1 | 76.0 | NA | NA | ||||||
6oxl | 2 | Q9DBG3 | 93.06 | 0.0 |
EM |
2019-09-11 | GLU | B:434 | B:434 | 151.0 | 0.795 | G | -70.2 | -25.6 | 122.0 | 0.642 | 0.153 |
F:None:0.153 |
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6yae | 2 | P63010 | 93.06 | 0.0 |
EM |
2020-07-29 | GLU | B:434 | B:434 | 164.0 | 0.863 | H | -59.0 | -24.4 | 164.0 | 0.863 | 0.0 | ||||||
1w63 | 2 | P52303 | 97.77 | 0.0 |
X-RAY |
2004-09-21 | GLU | B:434 | B:434 | 142.0 | 0.747 | T | -8.7 | -73.0 | 142.0 | 0.747 | 0.0 | ||||||
GLU | D:434 | D:434 | 139.0 | 0.732 | T | -8.8 | -73.0 | NA | NA | NA | |||||||||||||
GLU | F:434 | F:434 | 139.0 | 0.732 | T | -8.7 | -73.0 | NA | NA | NA | |||||||||||||
GLU | H:434 | H:434 | 139.0 | 0.732 | T | -8.6 | -73.1 | NA | NA | NA | |||||||||||||
GLU | J:434 | J:434 | 138.0 | 0.726 | T | -8.8 | -73.0 | NA | NA | NA | |||||||||||||
GLU | L:434 | L:434 | 140.0 | 0.737 | T | -8.7 | -73.1 | NA | NA | NA | |||||||||||||
6uri | 4 | P63010 | 92.55 | 0.0 |
X-RAY |
2020-07-29 | GLY | D:458 | B:434 | 49.0 | 0.653 | T | -55.3 | -28.2 | 49.0 | 0.653 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q10567-f1 | 1 | Q10567 | 99.89 | 0.0 | GLU | A:434 | A:434 | 134.0 | 0.705 | T | -66.6 | -3.8 | |
af-p63010-f1 | 1 | P63010 | 83.49 | 0.0 | GLU | A:434 | A:434 | 139.0 | 0.732 | T | -64.7 | -11.5 |