Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr22 | 29747786 | . | C | A | CCDS13855.1:NM_001127.3:c.967Gtg>Ttg_NP_001118.3:p.323V>L | Homo sapiens adaptor related protein complex 1 beta 1 subunit (AP1B1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6yaf | 2 | P63010 | 83.49 | 0.0 |
EM |
2020-07-29 | VAL | B:330 | B:323 | 39.0 | 0.252 | G | -63.4 | -28.1 | 39.0 | 0.252 | 0.0 | ||||||
6yah | 2 | P63010 | 83.49 | 0.0 |
EM |
2020-07-29 | VAL | B:330 | B:323 | 38.0 | 0.245 | G | -63.5 | -28.0 | 38.0 | 0.245 | 0.0 | ||||||
6cm9 | 2 | Q10567 | 99.66 | 0.0 |
EM |
2018-08-08 | VAL | C:325 | B:323 | 51.0 | 0.329 | G | -80.9 | -2.3 | 6.0 | 0.039 | 0.29 |
G:P35585:0.29 |
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6d83 | 2 | Q10567 | 99.66 | 0.0 |
EM |
2018-08-08 | VAL | C:325 | B:323 | 47.0 | 0.303 | G | -84.0 | -14.7 | 7.0 | 0.045 | 0.258 |
G:P35585:0.258 |
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6d84 | 2 | Q10567 | 99.66 | 0.0 |
EM |
2018-08-08 | VAL | C:325 | B:323 | 49.0 | 0.316 | G | -83.2 | -17.0 | 6.0 | 0.039 | 0.277 |
G:P35585:0.277 |
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VAL | K:325 | F:323 | 50.0 | 0.323 | G | -83.3 | -16.9 | 7.0 | 0.045 | 0.278 |
O:P35585:0.277 |
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6dff | 2 | Q10567 | 99.66 | 0.0 |
EM |
2018-08-08 | VAL | C:325 | B:323 | 51.0 | 0.329 | G | -86.7 | 4.3 | 9.0 | 0.058 | 0.271 |
G:P35585:0.271 |
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4p6z | 4 | Q10567 | 99.66 | 0.0 |
X-RAY |
2014-05-21 | VAL | D:339 | B:323 | 50.0 | 0.323 | G | -69.8 | -13.8 | 17.0 | 0.11 | 0.213 |
C:P35585:0.213 |
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4hmy | 2 | Q10567 | 99.49 | 0.0 |
X-RAY |
2013-03-06 | VAL | B:325 | B:323 | 64.0 | 0.413 | T | -43.8 | -25.2 | 4.0 | 0.026 | 0.387 |
C:P35585:0.387 |
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4uqi | 2 | P63010 | 89.6 | 0.0 |
X-RAY |
2014-07-30 | VAL | B:323 | B:323 | 37.0 | 0.239 | G | -68.4 | -18.1 | 37.0 | 0.239 | 0.0 | ||||||
6cri | 2 | Q10567 | 99.65 | 0.0 |
EM |
2018-08-01 | VAL | B:310 | B:323 | 50.0 | 0.323 | G | -72.0 | -16.5 | 8.0 | 0.052 | 0.271 |
F:P35585:0.271 |
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VAL | J:310 | I:323 | 49.0 | 0.316 | G | -72.0 | -16.5 | 8.0 | 0.052 | 0.264 |
N:P35585:0.265 |
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VAL | R:310 | J:323 | 50.0 | 0.323 | G | -71.9 | -16.5 | 7.0 | 0.045 | 0.278 |
V:P35585:0.277 |
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2xa7 | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2010-07-21 | VAL | B:323 | B:323 | 54.0 | 0.348 | G | -43.2 | -47.8 | 51.0 | 0.329 | 0.019 |
C:P84092:0.019 |
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6qh5 | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2019-09-04 | VAL | B:323 | B:323 | 34.0 | 0.219 | G | -45.2 | -41.0 | 34.0 | 0.219 | 0.0 | ||||||
6qh6 | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2019-09-04 | VAL | B:323 | B:323 | 50.0 | 0.323 | G | -73.1 | -37.5 | 50.0 | 0.323 | 0.0 | ||||||
6qh7 | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2019-09-04 | VAL | B:323 | B:323 | 52.0 | 0.335 | G | -74.9 | -34.2 | 52.0 | 0.335 | 0.0 | ||||||
2jkr | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2008-10-28 | VAL | B:323 | B:323 | 42.0 | 0.271 | G | -63.3 | -34.0 | 42.0 | 0.271 | 0.0 | ||||||
VAL | C:323 | E:323 | 44.0 | 0.284 | G | -66.6 | -31.6 | NA | NA | NA | |||||||||||||
2jkt | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2008-10-28 | VAL | B:323 | B:323 | 45.0 | 0.29 | G | -59.2 | -36.9 | 45.0 | 0.29 | 0.0 | ||||||
VAL | C:323 | E:323 | 45.0 | 0.29 | G | -61.7 | -37.1 | NA | NA | NA | |||||||||||||
2vgl | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2007-12-25 | VAL | B:323 | B:323 | 36.0 | 0.232 | T | -67.4 | -33.4 | 36.0 | 0.232 | 0.0 | ||||||
6owo | 2 | Q9DBG3 | 93.06 | 0.0 |
EM |
2019-09-11 | VAL | B:323 | B:323 | 42.0 | 0.271 | T | -69.0 | -29.8 | 42.0 | 0.271 | 0.0 | ||||||
6owt | 2 | P62944 | 93.06 | 0.0 |
EM |
2019-09-25 | VAL | B:323 | B:323 | 52.0 | 0.335 | G | -83.2 | -1.7 | 52.0 | 0.335 | 0.0 | ||||||
6oxl | 2 | Q9DBG3 | 93.06 | 0.0 |
EM |
2019-09-11 | VAL | B:323 | B:323 | 54.0 | 0.348 | T | -73.6 | -26.1 | 54.0 | 0.348 | 0.0 | ||||||
6yae | 2 | P63010 | 93.06 | 0.0 |
EM |
2020-07-29 | VAL | B:323 | B:323 | 49.0 | 0.316 | T | -68.0 | -16.9 | 49.0 | 0.316 | 0.0 | ||||||
1w63 | 2 | P52303 | 97.77 | 0.0 |
X-RAY |
2004-09-21 | VAL | B:323 | B:323 | 66.0 | 0.426 | T | -111.7 | -37.9 | 66.0 | 0.426 | 0.0 | ||||||
VAL | D:323 | D:323 | 66.0 | 0.426 | T | -111.8 | -37.9 | NA | NA | NA | |||||||||||||
VAL | F:323 | F:323 | 67.0 | 0.432 | T | -111.7 | -38.0 | NA | NA | NA | |||||||||||||
VAL | H:323 | H:323 | 68.0 | 0.439 | T | -111.7 | -37.9 | NA | NA | NA | |||||||||||||
VAL | J:323 | J:323 | 68.0 | 0.439 | T | -111.8 | -38.0 | NA | NA | NA | |||||||||||||
VAL | L:323 | L:323 | 67.0 | 0.432 | T | -111.7 | -38.0 | NA | NA | NA | |||||||||||||
6uri | 4 | P63010 | 92.55 | 0.0 |
X-RAY |
2020-07-29 | VAL | D:347 | B:323 | 61.0 | 0.394 | T | -61.0 | -35.7 | 61.0 | 0.394 | 0.0 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q10567-f1 | 1 | Q10567 | 99.89 | 0.0 | VAL | A:323 | A:323 | 40.0 | 0.258 | G | -71.4 | -28.9 | |
af-p63010-f1 | 1 | P63010 | 83.49 | 0.0 | VAL | A:323 | A:323 | 41.0 | 0.265 | G | -66.6 | -28.9 |