Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr22 29750724 . C A CCDS13855.1:NM_001127.3:c.853Gcc>Tcc_NP_001118.3:p.285A>S Homo sapiens adaptor related protein complex 1 beta 1 subunit (AP1B1), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6yaf 2 P63010 83.49 0.0 EM
2020-07-29 ALA B:292 B:285 7.0 0.061 H -64.0 -51.2 7.0 0.061 0.0
6yah 2 P63010 83.49 0.0 EM
2020-07-29 ALA B:292 B:285 8.0 0.07 H -64.0 -51.2 8.0 0.07 0.0
6cm9 2 Q10567 99.66 0.0 EM
2018-08-08 ALA C:287 B:285 19.0 0.165 H -78.5 -42.5 19.0 0.165 0.0
6d83 2 Q10567 99.66 0.0 EM
2018-08-08 ALA C:287 B:285 16.0 0.139 H -69.4 -41.3 16.0 0.139 0.0
6d84 2 Q10567 99.66 0.0 EM
2018-08-08 ALA C:287 B:285 15.0 0.13 H -68.9 -40.1 15.0 0.13 0.0
ALA K:287 F:285 15.0 0.13 H -68.9 -40.0 15.0 0.13 0.0
6dff 2 Q10567 99.66 0.0 EM
2018-08-08 ALA C:287 B:285 15.0 0.13 H -68.8 -41.3 15.0 0.13 0.0
4p6z 4 Q10567 99.66 0.0 X-RAY
2014-05-21 ALA D:301 B:285 11.0 0.096 H -70.1 -50.5 11.0 0.096 0.0 HOH
9.629
C
O
4hmy 2 Q10567 99.49 0.0 X-RAY
2013-03-06 ALA B:287 B:285 6.0 0.052 H -44.8 -55.7 6.0 0.052 0.0
4uqi 2 P63010 89.6 0.0 X-RAY
2014-07-30 ALA B:285 B:285 13.0 0.113 H -69.5 -59.5 13.0 0.113 0.0
6cri 2 Q10567 99.65 0.0 EM
2018-08-01 ALA B:272 B:285 19.0 0.165 H -66.7 -43.7 19.0 0.165 0.0
ALA J:272 I:285 20.0 0.174 H -66.7 -43.7 20.0 0.174 0.0
ALA R:272 J:285 19.0 0.165 H -66.8 -43.6 19.0 0.165 0.0
2xa7 2 P63010 93.06 0.0 X-RAY
2010-07-21 ALA B:285 B:285 5.0 0.043 H -87.1 -45.6 5.0 0.043 0.0
6qh5 2 P63010 93.06 0.0 X-RAY
2019-09-04 ALA B:285 B:285 11.0 0.096 H -64.0 -68.8 11.0 0.096 0.0
6qh6 2 P63010 93.06 0.0 X-RAY
2019-09-04 ALA B:285 B:285 5.0 0.043 H -72.9 -55.7 5.0 0.043 0.0
6qh7 2 P63010 93.06 0.0 X-RAY
2019-09-04 ALA B:285 B:285 10.0 0.087 H -75.1 -54.8 10.0 0.087 0.0
2jkr 2 P63010 93.06 0.0 X-RAY
2008-10-28 ALA B:285 B:285 9.0 0.078 H -72.6 -59.4 9.0 0.078 0.0
ALA C:285 E:285 10.0 0.087 H -72.6 -58.8 NA NA NA
2jkt 2 P63010 93.06 0.0 X-RAY
2008-10-28 ALA B:285 B:285 9.0 0.078 H -64.6 -61.7 9.0 0.078 0.0
ALA C:285 E:285 9.0 0.078 H -65.6 -61.1 NA NA NA
2vgl 2 P63010 93.06 0.0 X-RAY
2007-12-25 ALA B:285 B:285 11.0 0.096 H -66.1 -66.9 11.0 0.096 0.0
6owo 2 Q9DBG3 93.06 0.0 EM
2019-09-11 ALA B:285 B:285 14.0 0.122 H -77.2 -41.6 14.0 0.122 0.0
6owt 2 P62944 93.06 0.0 EM
2019-09-25 ALA B:285 B:285 10.0 0.087 H -75.5 -37.3 10.0 0.087 0.0
6oxl 2 Q9DBG3 93.06 0.0 EM
2019-09-11 ALA B:285 B:285 13.0 0.113 H -83.2 -39.8 13.0 0.113 0.0
6yae 2 P63010 93.06 0.0 EM
2020-07-29 ALA B:285 B:285 17.0 0.148 H -76.6 -47.5 17.0 0.148 0.0
1w63 2 P52303 97.77 0.0 X-RAY
2004-09-21 ALA B:285 B:285 14.0 0.122 H -63.6 -74.3 14.0 0.122 0.0
ALA D:285 D:285 14.0 0.122 H -63.6 -74.3 NA NA NA
ALA F:285 F:285 15.0 0.13 H -63.6 -74.3 NA NA NA
ALA H:285 H:285 13.0 0.113 H -63.6 -74.3 NA NA NA
ALA J:285 J:285 15.0 0.13 H -63.6 -74.3 NA NA NA
ALA L:285 L:285 15.0 0.13 H -63.6 -74.3 NA NA NA
6uri 4 P63010 92.55 0.0 X-RAY
2020-07-29 ALA D:309 B:285 9.0 0.078 H -78.4 -46.8 9.0 0.078 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q10567-f1 1 Q10567 99.89 0.0 ALA A:285 A:285 8.0 0.07 H -67.9 -52.1
af-p63010-f1 1 P63010 83.49 0.0 ALA A:285 A:285 8.0 0.07 H -67.1 -53.0