Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr22 29752517 . T A CCDS13855.1:NM_001127.3:c.614aAc>aTc_NP_001118.3:p.205N>I Homo sapiens adaptor related protein complex 1 beta 1 subunit (AP1B1), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6yaf 2 P63010 83.49 0.0 EM
2020-07-29 ASN B:212 B:205 76.0 0.475 H -66.0 -43.4 76.0 0.475 0.0
6yah 2 P63010 83.49 0.0 EM
2020-07-29 ASN B:212 B:205 74.0 0.463 H -66.0 -43.4 74.0 0.463 0.0
6cm9 2 Q10567 99.66 0.0 EM
2018-08-08 ASN C:207 B:205 73.0 0.456 H -62.9 -34.8 73.0 0.456 0.0
6d83 2 Q10567 99.66 0.0 EM
2018-08-08 ASN C:207 B:205 61.0 0.381 H -66.4 -33.0 61.0 0.381 0.0
6d84 2 Q10567 99.66 0.0 EM
2018-08-08 ASN C:207 B:205 63.0 0.394 H -69.0 -27.0 63.0 0.394 0.0
ASN K:207 F:205 61.0 0.381 H -68.9 -27.1 61.0 0.381 0.0
6dff 2 Q10567 99.66 0.0 EM
2018-08-08 ASN C:207 B:205 69.0 0.431 H -61.8 -37.8 69.0 0.431 0.0
4p6z 4 Q10567 99.66 0.0 X-RAY
2014-05-21 ASN D:221 B:205 72.0 0.45 H -58.0 -46.4 72.0 0.45 0.0
4hmy 2 Q10567 99.49 0.0 X-RAY
2013-03-06 ASN B:207 B:205 79.0 0.494 H -59.4 -40.4 79.0 0.494 0.0
4uqi 2 P63010 89.6 0.0 X-RAY
2014-07-30 ASN B:205 B:205 65.0 0.406 H -57.3 -44.5 65.0 0.406 0.0
6cri 2 Q10567 99.65 0.0 EM
2018-08-01 ASN B:192 B:205 66.0 0.412 H -64.6 -36.9 66.0 0.412 0.0
ASN J:192 I:205 65.0 0.406 H -64.7 -36.8 65.0 0.406 0.0
ASN R:192 J:205 69.0 0.431 H -64.6 -36.9 69.0 0.431 0.0
2xa7 2 P63010 93.06 0.0 X-RAY
2010-07-21 ASN B:205 B:205 107.0 0.669 H -61.2 -51.6 107.0 0.669 0.0
6qh5 2 P63010 93.06 0.0 X-RAY
2019-09-04 ASN B:205 B:205 84.0 0.525 H -53.8 -37.3 84.0 0.525 0.0
6qh6 2 P63010 93.06 0.0 X-RAY
2019-09-04 ASN B:205 B:205 87.0 0.544 H -59.6 -32.2 87.0 0.544 0.0
6qh7 2 P63010 93.06 0.0 X-RAY
2019-09-04 ASN B:205 B:205 84.0 0.525 H -59.6 -30.9 84.0 0.525 0.0
2jkr 2 P63010 93.06 0.0 X-RAY
2008-10-28 ASN B:205 B:205 90.0 0.562 H -57.5 -33.9 90.0 0.562 0.0
ASN C:205 E:205 91.0 0.569 H -58.1 -35.0 NA NA NA
2jkt 2 P63010 93.06 0.0 X-RAY
2008-10-28 ASN B:205 B:205 88.0 0.55 H -71.0 -27.2 88.0 0.55 0.0
ASN C:205 E:205 87.0 0.544 H -70.3 -29.8 NA NA NA
2vgl 2 P63010 93.06 0.0 X-RAY
2007-12-25 ASN B:205 B:205 83.0 0.519 H -56.7 -43.6 83.0 0.519 0.0
6owo 2 Q9DBG3 93.06 0.0 EM
2019-09-11 ASN B:205 B:205 64.0 0.4 H -72.2 -32.5 64.0 0.4 0.0
6owt 2 P62944 93.06 0.0 EM
2019-09-25 ASN B:205 B:205 54.0 NA H -67.1 -35.7 54.0 NA NA
6oxl 2 Q9DBG3 93.06 0.0 EM
2019-09-11 ASN B:205 B:205 73.0 0.456 H -69.5 -27.4 73.0 0.456 0.0
6yae 2 P63010 93.06 0.0 EM
2020-07-29 ASN B:205 B:205 89.0 0.556 H -59.8 -42.8 89.0 0.556 0.0
1w63 2 P52303 97.77 0.0 X-RAY
2004-09-21 ASN B:205 B:205 70.0 0.438 H -72.5 -30.8 70.0 0.438 0.0
ASN D:205 D:205 71.0 0.444 H -72.5 -30.8 NA NA NA
ASN F:205 F:205 71.0 0.444 H -72.5 -30.9 NA NA NA
ASN H:205 H:205 71.0 0.444 H -72.5 -30.8 NA NA NA
ASN J:205 J:205 71.0 0.444 H -72.4 -30.8 NA NA NA
ASN L:205 L:205 69.0 0.431 H -72.4 -30.9 NA NA NA
6uri 4 P63010 92.55 0.0 X-RAY
2020-07-29 ASN D:229 B:205 58.0 0.362 T -61.3 -32.6 58.0 0.362 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q10567-f1 1 Q10567 99.89 0.0 ASN A:205 A:205 88.0 0.55 H -64.5 -33.1
af-p63010-f1 1 P63010 83.49 0.0 ASN A:205 A:205 87.0 0.544 H -62.9 -35.7