Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr22 | 29754900 | . | G | A | CCDS13855.1:NM_001127.3:c.340Cgc>Tgc_NP_001118.3:p.114R>C | Homo sapiens adaptor related protein complex 1 beta 1 subunit (AP1B1), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6yaf | 2 | P63010 | 83.49 | 0.0 |
EM |
2020-07-29 | ARG | B:121 | B:114 | 55.0 | 0.244 | -140.7 | 119.7 | 35.0 | 0.156 | 0.088 |
C:P84092:0.089 |
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6yah | 2 | P63010 | 83.49 | 0.0 |
EM |
2020-07-29 | ARG | B:121 | B:114 | 55.0 | 0.244 | -140.7 | 119.8 | 36.0 | 0.16 | 0.084 |
C:P84092:0.084 |
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6cm9 | 2 | Q10567 | 99.66 | 0.0 |
EM |
2018-08-08 | ARG | C:116 | B:114 | 131.0 | 0.582 | -96.4 | 80.0 | 125.0 | 0.556 | 0.026 |
G:P35585:0.027 |
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6d83 | 2 | Q10567 | 99.66 | 0.0 |
EM |
2018-08-08 | ARG | C:116 | B:114 | 135.0 | 0.6 | -102.4 | 81.2 | 100.0 | 0.444 | 0.156 |
G:P35585:0.156 |
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6d84 | 2 | Q10567 | 99.66 | 0.0 |
EM |
2018-08-08 | ARG | C:116 | B:114 | 135.0 | 0.6 | -102.2 | 82.7 | 111.0 | 0.493 | 0.107 |
G:P35585:0.107 |
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ARG | K:116 | F:114 | 134.0 | 0.596 | -102.1 | 82.7 | 111.0 | 0.493 | 0.103 |
O:P35585:0.102 |
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6dff | 2 | Q10567 | 99.66 | 0.0 |
EM |
2018-08-08 | ARG | C:116 | B:114 | 138.0 | 0.613 | -96.5 | 74.8 | 125.0 | 0.556 | 0.057 |
G:P35585:0.058 |
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4p6z | 4 | Q10567 | 99.66 | 0.0 |
X-RAY |
2014-05-21 | ARG | D:130 | B:114 | 107.0 | 0.476 | -92.3 | 56.6 | 57.0 | 0.253 | 0.223 |
C:P35585:0.222 |
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4hmy | 2 | Q10567 | 99.49 | 0.0 |
X-RAY |
2013-03-06 | ARG | B:116 | B:114 | 117.0 | 0.52 | -110.9 | 23.1 | 91.0 | 0.404 | 0.116 |
C:P35585:0.116 |
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4uqi | 2 | P63010 | 89.6 | 0.0 |
X-RAY |
2014-07-30 | ARG | B:114 | B:114 | 121.0 | 0.538 | -148.4 | 89.2 | 80.0 | 0.356 | 0.182 |
C:P84092:0.182 |
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6cri | 2 | Q10567 | 99.65 | 0.0 |
EM |
2018-08-01 | ARG | B:101 | B:114 | 121.0 | 0.538 | -110.4 | 87.8 | 114.0 | 0.507 | 0.031 |
F:P35585:0.031 |
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ARG | J:101 | I:114 | 119.0 | 0.529 | -110.4 | 87.8 | 112.0 | 0.498 | 0.031 |
N:P35585:0.031 |
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ARG | R:101 | J:114 | 122.0 | 0.542 | -110.4 | 87.8 | 115.0 | 0.511 | 0.031 |
V:P35585:0.031 |
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2xa7 | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2010-07-21 | ARG | B:114 | B:114 | 88.0 | 0.391 | -97.8 | 77.0 | 49.0 | 0.218 | 0.173 |
C:P84092:0.173 |
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6qh5 | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2019-09-04 | ARG | B:114 | B:114 | 141.0 | 0.627 | -126.5 | 61.2 | 66.0 | 0.293 | 0.334 |
C:P84092:0.333 |
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6qh6 | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2019-09-04 | ARG | B:114 | B:114 | 140.0 | 0.622 | -106.4 | 106.4 | 110.0 | 0.489 | 0.133 |
D:P84092:0.133 |
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6qh7 | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2019-09-04 | ARG | B:114 | B:114 | 141.0 | 0.627 | -111.3 | 104.4 | 108.0 | 0.48 | 0.147 |
D:Q3ZC13:0.147 |
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2jkr | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2008-10-28 | ARG | B:114 | B:114 | 141.0 | 0.627 | -84.8 | 90.6 | 88.0 | 0.391 | 0.236 |
F:P84092:0.236 |
HOH |
9.357 |
CG |
O |
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ARG | C:114 | E:114 | 141.0 | 0.627 | -83.6 | 90.3 | NA | NA | NA | ||||||||||||||
2jkt | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2008-10-28 | ARG | B:114 | B:114 | 147.0 | 0.653 | -80.4 | 85.8 | 96.0 | 0.427 | 0.226 |
F:P84092:0.227 |
HOH |
9.503 |
CG |
O |
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ARG | C:114 | E:114 | 148.0 | 0.658 | -79.4 | 85.1 | NA | NA | NA | ||||||||||||||
2vgl | 2 | P63010 | 93.06 | 0.0 |
X-RAY |
2007-12-25 | ARG | B:114 | B:114 | 115.0 | 0.511 | -141.5 | 87.9 | 83.0 | 0.369 | 0.142 |
C:P84092:0.142 |
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6owo | 2 | Q9DBG3 | 93.06 | 0.0 |
EM |
2019-09-11 | ARG | B:114 | B:114 | 184.0 | 0.818 | -85.7 | 75.6 | 141.0 | 0.627 | 0.191 |
C:P84091:0.191 |
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6owt | 2 | P62944 | 93.06 | 0.0 |
EM |
2019-09-25 | ARG | B:114 | B:114 | 140.0 | 0.622 | -92.4 | 74.8 | 140.0 | 0.622 | 0.0 | |||||||
6oxl | 2 | Q9DBG3 | 93.06 | 0.0 |
EM |
2019-09-11 | ARG | B:114 | B:114 | 121.0 | 0.538 | -95.2 | 64.2 | 98.0 | 0.436 | 0.102 |
C:P84091:0.102 |
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6yae | 2 | P63010 | 93.06 | 0.0 |
EM |
2020-07-29 | ARG | B:114 | B:114 | 139.0 | 0.618 | -128.4 | 88.4 | 92.0 | 0.409 | 0.209 |
C:P84092:0.209 |
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1w63 | 2 | P52303 | 97.77 | 0.0 |
X-RAY |
2004-09-21 | ARG | B:114 | B:114 | 157.0 | 0.698 | -127.1 | 10.1 | 144.0 | 0.64 | 0.058 |
M:P35585:0.058 |
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ARG | D:114 | D:114 | 157.0 | 0.698 | -127.1 | 10.0 | NA | NA | NA | ||||||||||||||
ARG | F:114 | F:114 | 155.0 | 0.689 | -127.1 | 10.0 | NA | NA | NA | ||||||||||||||
ARG | H:114 | H:114 | 156.0 | 0.693 | -127.1 | 10.1 | NA | NA | NA | ||||||||||||||
ARG | J:114 | J:114 | 158.0 | 0.702 | -127.0 | 10.0 | NA | NA | NA | ||||||||||||||
ARG | L:114 | L:114 | 158.0 | 0.702 | -127.1 | 10.1 | NA | NA | NA | ||||||||||||||
6uri | 4 | P63010 | 92.55 | 0.0 |
X-RAY |
2020-07-29 | ARG | D:138 | B:114 | 175.0 | 0.778 | -99.6 | 110.8 | 163.0 | 0.724 | 0.054 |
E:Q96CW1:0.053 |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q10567-f1 | 1 | Q10567 | 99.89 | 0.0 | ARG | A:114 | A:114 | 144.0 | 0.64 | 48.1 | 47.8 | ||
af-p63010-f1 | 1 | P63010 | 83.49 | 0.0 | ARG | A:114 | A:114 | 111.0 | 0.493 | 47.6 | 46.3 |