Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr22 29755836 . T A CCDS13855.1:NM_001127.3:c.256Atg>Ttg_NP_001118.3:p.86M>L Homo sapiens adaptor related protein complex 1 beta 1 subunit (AP1B1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6yaf 2 P63010 83.49 0.0 EM
 2020-07-29 MET B:93 B:86 52.0 0.281 H -58.5 -41.7 52.0 0.281 0.0
6yah 2 P63010 83.49 0.0 EM
 2020-07-29 MET B:93 B:86 51.0 0.276 H -58.5 -41.6 51.0 0.276 0.0
6cm9 2 Q10567 99.66 0.0 EM
 2018-08-08 MET C:88 B:86 154.0 0.832 S -97.2 38.9 25.0 0.135 0.697 D:P84077:0.697
 GTP
 9.515
 CE
 O3G
6d83 2 Q10567 99.66 0.0 EM
 2018-08-08 MET C:88 B:86 148.0 0.8 G -82.9 23.1 22.0 0.119 0.681 D:P84077:0.681
 GTP
 9.139
 CE
 O1G
6d84 2 Q10567 99.66 0.0 EM
 2018-08-08 MET C:88 B:86 147.0 0.795 G -83.1 28.8 17.0 0.092 0.703 D:P84077:0.703
 GTP
 9.328
 CE
 O1G
MET K:88 F:86 146.0 0.789 G -83.0 28.8 17.0 0.092 0.697 L:P84077:0.697
 GTP
 9.221
 CE
 O3G
6dff 2 Q10567 99.66 0.0 EM
 2018-08-08 MET C:88 B:86 154.0 0.832 G -88.9 30.0 23.0 0.124 0.708 D:P84077:0.708
 GTP
 9.596
 CE
 O3G
4p6z 4 Q10567 99.66 0.0 X-RAY
 2014-05-21 MET D:102 B:86 125.0 0.676 G -64.8 -14.4 125.0 0.676 0.0
4hmy 2 Q10567 99.49 0.0 X-RAY
 2013-03-06 MET B:88 B:86 74.0 0.4 T -56.3 -48.8 4.0 0.022 0.378 E:P84077:0.378
4uqi 2 P63010 89.6 0.0 X-RAY
 2014-07-30 MET B:86 B:86 112.0 0.605 T -49.9 -25.7 112.0 0.605 0.0
6cri 2 Q10567 99.65 0.0 EM
 2018-08-01 MET B:73 B:86 137.0 0.741 T -90.7 34.1 15.0 0.081 0.66 C:P84077:0.659
MET J:73 I:86 137.0 0.741 T -90.7 34.1 17.0 0.092 0.649 K:P84077:0.649
MET R:73 J:86 138.0 0.746 T -90.7 34.0 17.0 0.092 0.654 S:P84077:0.654
2xa7 2 P63010 93.06 0.0 X-RAY
 2010-07-21 MET B:86 B:86 67.0 0.362 G -44.7 -45.2 67.0 0.362 0.0
6qh5 2 P63010 93.06 0.0 X-RAY
 2019-09-04 MET B:86 B:86 111.0 0.6 T -106.2 1.0 111.0 0.6 0.0
6qh6 2 P63010 93.06 0.0 X-RAY
 2019-09-04 MET B:86 B:86 153.0 0.827 G -52.3 -31.2 153.0 0.827 0.0
6qh7 2 P63010 93.06 0.0 X-RAY
 2019-09-04 MET B:86 B:86 150.0 0.811 G -59.8 -28.0 150.0 0.811 0.0
2jkr 2 P63010 93.06 0.0 X-RAY
 2008-10-28 MET B:86 B:86 112.0 0.605 G -78.1 -3.5 112.0 0.605 0.0
MET C:86 E:86 108.0 0.584 G -76.5 -5.2 NA NA NA
2jkt 2 P63010 93.06 0.0 X-RAY
 2008-10-28 MET B:86 B:86 112.0 0.605 G -77.3 -15.8 112.0 0.605 0.0
MET C:86 E:86 109.0 0.589 G -75.7 -17.3 NA NA NA
2vgl 2 P63010 93.06 0.0 X-RAY
 2007-12-25 MET B:86 B:86 108.0 0.584 T -54.7 -10.5 108.0 0.584 0.0
6owo 2 Q9DBG3 93.06 0.0 EM
 2019-09-11 MET B:86 B:86 133.0 0.719 G -75.9 -10.6 133.0 0.719 0.0
6owt 2 P62944 93.06 0.0 EM
 2019-09-25 MET B:86 B:86 104.0 0.562 S -75.5 -40.4 104.0 0.562 0.0
6oxl 2 Q9DBG3 93.06 0.0 EM
 2019-09-11 MET B:86 B:86 129.0 0.697 G -68.7 -19.5 129.0 0.697 0.0
6yae 2 P63010 93.06 0.0 EM
 2020-07-29 MET B:86 B:86 113.0 0.611 T -68.1 8.2 113.0 0.611 0.0
1w63 2 P52303 97.77 0.0 X-RAY
 2004-09-21 MET B:86 B:86 140.0 0.757 T -38.7 -9.6 140.0 0.757 0.0
MET D:86 D:86 142.0 0.768 T -38.7 -9.6 NA NA NA
MET F:86 F:86 141.0 0.762 T -38.7 -9.6 NA NA NA
MET H:86 H:86 143.0 0.773 T -38.6 -9.7 NA NA NA
MET J:86 J:86 146.0 0.789 T -38.7 -9.6 NA NA NA
MET L:86 L:86 144.0 0.778 T -38.7 -9.5 NA NA NA
6uri 4 P63010 92.55 0.0 X-RAY
 2020-07-29 MET D:110 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q10567-f1 1 Q10567 99.89 0.0 MET A:86 A:86 132.0 0.714 H -64.0 -27.8
af-p63010-f1 1 P63010 83.49 0.0 MET A:86 A:86 133.0 0.719 H -64.8 -28.9