Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr22 29755925 . T A CCDS13855.1:NM_001127.3:c.167aAc>aTc_NP_001118.3:p.56N>I Homo sapiens adaptor related protein complex 1 beta 1 subunit (AP1B1), transcript variant 1, mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6yaf 2 P63010 83.49 0.0 EM
 2020-07-29 ASN B:63 B:56 103.0 0.644 H -74.6 -42.4 103.0 0.644 0.0
6yah 2 P63010 83.49 0.0 EM
 2020-07-29 ASN B:63 B:56 101.0 0.631 H -74.6 -42.4 101.0 0.631 0.0
6cm9 2 Q10567 99.66 0.0 EM
 2018-08-08 ASN C:58 B:56 118.0 0.738 T -64.9 -35.7 25.0 0.156 0.582 D:P84077:0.581
6d83 2 Q10567 99.66 0.0 EM
 2018-08-08 ASN C:58 B:56 113.0 0.706 G -69.3 -41.0 23.0 0.144 0.562 D:P84077:0.562
6d84 2 Q10567 99.66 0.0 EM
 2018-08-08 ASN C:58 B:56 114.0 0.713 G -70.3 -35.5 18.0 0.113 0.6 D:P84077:0.6
ASN K:58 F:56 115.0 0.719 G -70.4 -35.4 18.0 0.113 0.606 L:P84077:0.606
6dff 2 Q10567 99.66 0.0 EM
 2018-08-08 ASN C:58 B:56 114.0 0.713 G -67.1 -44.5 19.0 0.119 0.594 D:P84077:0.594
4p6z 4 Q10567 99.66 0.0 X-RAY
 2014-05-21 ASN D:72 B:56 108.0 0.675 T -61.4 -7.5 108.0 0.675 0.0
4hmy 2 Q10567 99.49 0.0 X-RAY
 2013-03-06 ASN B:58 B:56 105.0 0.656 H -69.9 -41.0 10.0 0.062 0.594 E:P84077:0.594
4uqi 2 P63010 89.6 0.0 X-RAY
 2014-07-30 ASN B:56 B:56 73.0 0.456 H -69.6 -32.5 73.0 0.456 0.0
6cri 2 Q10567 99.65 0.0 EM
 2018-08-01 ASN B:43 B:56 113.0 0.706 H -66.1 -40.7 22.0 0.138 0.568 C:P84077:0.569
ASN J:43 I:56 113.0 0.706 H -66.1 -40.8 20.0 0.125 0.581 K:P84077:0.581
ASN R:43 J:56 113.0 0.706 H -66.1 -40.7 19.0 0.119 0.587 S:P84077:0.588
2xa7 2 P63010 93.06 0.0 X-RAY
 2010-07-21 ASN B:56 B:56 104.0 0.65 H -51.4 -31.3 104.0 0.65 0.0
6qh5 2 P63010 93.06 0.0 X-RAY
 2019-09-04 ASN B:56 B:56 85.0 0.531 G -73.7 -21.4 85.0 0.531 0.0
6qh6 2 P63010 93.06 0.0 X-RAY
 2019-09-04 ASN B:56 NA:NA DO NA DO DO DO NA NA NA
6qh7 2 P63010 93.06 0.0 X-RAY
 2019-09-04 ASN B:56 NA:NA DO NA DO DO DO NA NA NA
2jkr 2 P63010 93.06 0.0 X-RAY
 2008-10-28 ASN B:56 B:56 104.0 0.65 T -84.2 12.1 104.0 0.65 0.0
ASN C:56 E:56 101.0 0.631 T -83.2 11.3 NA NA NA
2jkt 2 P63010 93.06 0.0 X-RAY
 2008-10-28 ASN B:56 B:56 106.0 0.662 T -90.1 -1.1 106.0 0.662 0.0
ASN C:56 E:56 106.0 0.662 T -90.7 -0.9 NA NA NA
2vgl 2 P63010 93.06 0.0 X-RAY
 2007-12-25 ASN B:56 B:56 78.0 0.487 H -68.2 -28.2 78.0 0.487 0.0
6owo 2 Q9DBG3 93.06 0.0 EM
 2019-09-11 ASN B:56 B:56 96.0 0.6 G -70.6 -21.0 96.0 0.6 0.0
6owt 2 P62944 93.06 0.0 EM
 2019-09-25 ASN B:56 B:56 87.0 0.544 T -73.3 -18.1 87.0 0.544 0.0
6oxl 2 Q9DBG3 93.06 0.0 EM
 2019-09-11 ASN B:56 B:56 94.0 0.588 G -75.3 -15.8 94.0 0.588 0.0
6yae 2 P63010 93.06 0.0 EM
 2020-07-29 ASN B:56 B:56 78.0 0.487 H -57.5 -24.6 78.0 0.487 0.0
1w63 2 P52303 97.77 0.0 X-RAY
 2004-09-21 ASN B:56 B:56 96.0 0.6 T -54.6 9.6 96.0 0.6 0.0
ASN D:56 D:56 96.0 0.6 T -54.6 9.6 NA NA NA
ASN F:56 F:56 94.0 0.588 T -54.7 9.6 NA NA NA
ASN H:56 H:56 95.0 0.594 T -54.5 9.5 NA NA NA
ASN J:56 J:56 95.0 0.594 T -54.6 9.6 NA NA NA
ASN L:56 L:56 96.0 0.6 T -54.6 9.6 NA NA NA
6uri 4 P63010 92.55 0.0 X-RAY
 2020-07-29 ASN D:80 NA:NA DO NA DO DO DO NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q10567-f1 1 Q10567 99.89 0.0 ASN A:56 A:56 80.0 0.5 H -63.4 -24.8
af-p63010-f1 1 P63010 83.49 0.0 ASN A:56 A:56 83.0 0.519 H -62.3 -28.2