Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr22 30000099 . G A CCDS13861.1:NM_000268.3:c.112Gag>Aag_NP_000259.1:p.38E>K Homo sapiens neurofibromin 2 (NF2), transcript variant 1, mRNA.
pdb_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id
alphafold_id
label_asym_id
label_seq_id
label_comp_id
auth_asym_id
auth_seq_id

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6cds 1 P35240 99.71 0.0 X-RAY
2018-07-18 GLU A:38 A:38 64.0 0.337 E -67.8 145.7 64.0 0.337 0.0 HOH
7.580
OE1
O
GLU B:38 B:38 64.0 0.337 E -68.3 145.6 NA NA NA
7lwh 1 P35240 99.41 0.0 X-RAY
2021-08-11 GLU A:38 A:38 94.0 0.495 -76.2 152.3 94.0 0.495 0.0
1isn 1 P46662 99.38 0.0 X-RAY
2002-04-03 GLU A:21 A:38 73.0 0.384 E -59.5 154.7 73.0 0.384 0.0
4zrj 1 P35240 100.0 0.0 X-RAY
2015-06-17 GLU A:38 A:38 29.0 0.153 E -67.8 140.6 29.0 0.153 0.0 GOL
HOH
6.931
3.549
OE1
O
O1
O
4zri 1 P35240 100.0 0.0 X-RAY
2015-06-17 GLU A:42 A:38 93.0 0.489 E -61.0 148.5 93.0 0.489 0.0
GLU B:42 B:38 136.0 0.716 -66.5 148.7 NA NA NA
4zrk 1 P46662 99.38 0.0 X-RAY
2015-06-17 GLU A:42 A:38 122.0 0.642 E -67.6 145.5 122.0 0.642 0.0
GLU B:42 B:38 94.0 0.495 E -65.7 145.1 NA NA NA
GLU C:42 C:38 103.0 0.542 E -67.3 144.5 NA NA NA
GLU D:42 D:38 83.0 0.437 E -67.8 146.2 NA NA NA
1h4r 1 P35240 100.0 0.0 X-RAY
2002-01-16 GLU A:39 A:38 104.0 0.547 E -58.4 144.2 104.0 0.547 0.0 HOH
2.125
OE2
O
GLU B:39 B:38 103.0 0.542 E -64.4 125.0 103.0 0.542 0.0 SO4
HOH
9.425
2.248
O
OE1
O2
O
4p7i 1 P46662 99.36 0.0 X-RAY
2014-04-09 GLU A:42 A:38 86.0 0.453 E -64.3 142.5 86.0 0.453 0.0 HOH
7.107
N
O
GLU B:42 B:38 111.0 0.584 -54.5 139.1 NA NA NA
3u8z 1 P35240 100.0 0.0 X-RAY
2011-11-02 GLU A:26 A:38 85.0 0.447 E -63.0 147.1 46.0 0.242 0.205 C:P35240:0.205
HOH
3.521
O
O
GLU B:26 B:38 105.0 0.553 -63.3 147.0 NA NA NA
GLU C:26 C:38 104.0 0.547 -63.5 146.8 96.0 0.505 0.042 A:P35240:0.042
HOH
4.022
OE1
O
GLU D:26 D:38 105.0 0.553 -63.6 146.8 NA NA NA
3wa0 1 P46662 99.32 0.0 X-RAY
2014-05-28 GLU A:25 A:38 130.0 0.684 -79.7 135.1 130.0 0.684 0.0
GLU B:25 B:38 134.0 0.705 -73.1 130.2 NA NA NA
GLU C:25 C:38 106.0 0.558 -72.0 136.9 NA NA NA
GLU D:25 D:38 56.0 0.295 E -65.6 142.5 NA NA NA
GLU E:25 E:38 103.0 0.542 -63.2 152.0 NA NA NA
GLU F:25 F:38 67.0 0.353 -69.4 157.5 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p35240-f1 1 P35240 100.0 0.0 GLU A:38 A:38 51.0 0.268 E -71.1 144.2