Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr22 | 30032805 | . | G | A | CCDS13861.1:NM_000268.3:c.180tgG>tgA_NP_000259.1:p.60W>* | Homo sapiens neurofibromin 2 (NF2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6cds | 1 | P35240 | 99.71 | 0.0 |
X-RAY |
2018-07-18 | TRP | A:60 | A:60 | 126.0 | 0.494 | G | -49.2 | -27.3 | 126.0 | 0.494 | 0.0 |
PIO HOH |
3.445 4.509 |
CD2 CH2 |
C1 O |
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TRP | B:60 | B:60 | 128.0 | 0.502 | G | -46.1 | -31.1 | NA | NA | NA | |||||||||||||
7lwh | 1 | P35240 | 99.41 | 0.0 |
X-RAY |
2021-08-11 | TRP | A:60 | A:60 | 58.0 | 0.227 | G | -60.5 | -22.3 | 58.0 | 0.227 | 0.0 |
HOH |
2.648 |
O |
O |
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1isn | 1 | P46662 | 99.38 | 0.0 |
X-RAY |
2002-04-03 | TRP | A:43 | A:60 | 90.0 | 0.353 | G | -51.5 | -8.0 | 90.0 | 0.353 | 0.0 | ||||||
4zrj | 1 | P35240 | 100.0 | 0.0 |
X-RAY |
2015-06-17 | TRP | A:60 | A:60 | 60.0 | 0.235 | G | -57.7 | -26.0 | 60.0 | 0.235 | 0.0 |
GOL HOH |
2.589 3.930 |
O CZ2 |
O3 O |
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4zri | 1 | P35240 | 100.0 | 0.0 |
X-RAY |
2015-06-17 | TRP | A:64 | A:60 | 131.0 | 0.514 | G | -78.2 | -8.9 | 131.0 | 0.514 | 0.0 | ||||||
TRP | B:64 | B:60 | 136.0 | 0.533 | G | -50.2 | -35.2 | NA | NA | NA | |||||||||||||
4zrk | 1 | P46662 | 99.38 | 0.0 |
X-RAY |
2015-06-17 | TRP | A:64 | A:60 | 141.0 | 0.553 | G | -64.0 | -17.8 | 141.0 | 0.553 | 0.0 |
HOH |
4.419 |
CE2 |
O |
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TRP | B:64 | B:60 | 115.0 | 0.451 | G | -68.0 | -16.0 | NA | NA | NA | |||||||||||||
TRP | C:64 | C:60 | 124.0 | 0.486 | G | -66.9 | -14.0 | NA | NA | NA | |||||||||||||
TRP | D:64 | D:60 | 136.0 | 0.533 | G | -66.7 | -17.2 | NA | NA | NA | |||||||||||||
1h4r | 1 | P35240 | 100.0 | 0.0 |
X-RAY |
2002-01-16 | TRP | A:61 | A:60 | 117.0 | 0.459 | G | -64.9 | -17.3 | 117.0 | 0.459 | 0.0 |
HOH |
2.806 |
O |
O |
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TRP | B:61 | B:60 | 103.0 | 0.404 | G | -64.3 | -21.7 | 103.0 | 0.404 | 0.0 |
HOH |
2.558 |
O |
O |
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4p7i | 1 | P46662 | 99.36 | 0.0 |
X-RAY |
2014-04-09 | TRP | A:64 | A:60 | 137.0 | 0.537 | G | -60.4 | -22.9 | 137.0 | 0.537 | 0.0 |
HOH |
3.694 |
NE1 |
O |
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TRP | B:64 | B:60 | 132.0 | 0.518 | G | -65.8 | -21.0 | NA | NA | NA | |||||||||||||
3u8z | 1 | P35240 | 100.0 | 0.0 |
X-RAY |
2011-11-02 | TRP | A:48 | A:60 | 111.0 | 0.435 | G | -59.4 | -24.0 | 60.0 | 0.235 | 0.2 |
C:P35240:0.2 |
HOH |
2.702 |
O |
O |
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TRP | B:48 | B:60 | 110.0 | 0.431 | G | -59.8 | -22.8 | NA | NA | NA | |||||||||||||
TRP | C:48 | C:60 | 113.0 | 0.443 | G | -60.4 | -23.2 | 57.0 | 0.224 | 0.219 |
A:P35240:0.22 |
HOH |
2.718 |
O |
O |
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TRP | D:48 | D:60 | 111.0 | 0.435 | G | -59.0 | -23.7 | NA | NA | NA | |||||||||||||
3wa0 | 1 | P46662 | 99.32 | 0.0 |
X-RAY |
2014-05-28 | TRP | A:47 | A:60 | 109.0 | 0.427 | T | -69.1 | -24.6 | 109.0 | 0.427 | 0.0 |
HOH |
7.276 |
CD1 |
O |
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TRP | B:47 | B:60 | 99.0 | 0.388 | T | -78.2 | -17.4 | NA | NA | NA | |||||||||||||
TRP | C:47 | C:60 | 133.0 | 0.522 | T | -66.8 | -28.1 | NA | NA | NA | |||||||||||||
TRP | D:47 | D:60 | 120.0 | 0.471 | T | -70.8 | -17.2 | NA | NA | NA | |||||||||||||
TRP | E:47 | E:60 | 113.0 | 0.443 | T | -68.2 | -25.1 | NA | NA | NA | |||||||||||||
TRP | F:47 | F:60 | 120.0 | 0.471 | T | -73.7 | -17.7 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p35240-f1 | 1 | P35240 | 100.0 | 0.0 | TRP | A:60 | A:60 | 64.0 | 0.251 | G | -66.4 | -16.3 |