Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr22 | 30054233 | . | G | A | CCDS13861.1:NM_000268.3:c.655Gtg>Atg_NP_000259.1:p.219V>M | Homo sapiens neurofibromin 2 (NF2), transcript variant 1, mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6cds | 1 | P35240 | 99.71 | 0.0 |
X-RAY |
2018-07-18 | VAL | A:219 | A:219 | 18.0 | 0.116 | -96.8 | 129.3 | 18.0 | 0.116 | 0.0 |
PO4 HOH |
4.145 2.832 |
CG2 O |
O3 O |
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VAL | B:219 | B:219 | 19.0 | 0.123 | -96.8 | 129.1 | NA | NA | NA | ||||||||||||||
7lwh | 1 | P35240 | 99.41 | 0.0 |
X-RAY |
2021-08-11 | VAL | A:219 | A:219 | 17.0 | 0.11 | -88.8 | 128.0 | 17.0 | 0.11 | 0.0 |
IMD HOH |
3.665 2.675 |
CG2 O |
C2 O |
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1isn | 1 | P46662 | 99.38 | 0.0 |
X-RAY |
2002-04-03 | VAL | A:202 | A:219 | 14.0 | 0.09 | -115.5 | 128.4 | 14.0 | 0.09 | 0.0 | |||||||
4zrj | 1 | P35240 | 100.0 | 0.0 |
X-RAY |
2015-06-17 | VAL | A:219 | A:219 | 18.0 | 0.116 | -99.1 | 127.4 | 18.0 | 0.116 | 0.0 |
GOL GOL GOL HOH |
4.156 5.841 4.132 3.485 |
CG2 N O CG2 |
C2 C1 O1 O |
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4zri | 1 | P35240 | 100.0 | 0.0 |
X-RAY |
2015-06-17 | VAL | A:223 | A:219 | 15.0 | 0.097 | -94.1 | 121.4 | 15.0 | 0.097 | 0.0 |
HOH |
4.588 |
CG2 |
O |
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VAL | B:223 | B:219 | 19.0 | 0.123 | -107.6 | 123.2 | NA | NA | NA | ||||||||||||||
4zrk | 1 | P46662 | 99.38 | 0.0 |
X-RAY |
2015-06-17 | VAL | A:223 | A:219 | 15.0 | 0.097 | -106.9 | 133.8 | 15.0 | 0.097 | 0.0 |
HOH |
3.924 |
O |
O |
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VAL | B:223 | B:219 | 17.0 | 0.11 | -105.4 | 134.3 | NA | NA | NA | ||||||||||||||
VAL | C:223 | C:219 | 18.0 | 0.116 | -105.5 | 133.3 | NA | NA | NA | ||||||||||||||
VAL | D:223 | D:219 | 20.0 | 0.129 | -106.0 | 131.5 | NA | NA | NA | ||||||||||||||
1h4r | 1 | P35240 | 100.0 | 0.0 |
X-RAY |
2002-01-16 | VAL | A:220 | A:219 | 18.0 | 0.116 | -99.2 | 129.1 | 18.0 | 0.116 | 0.0 |
SO4 HOH |
4.568 2.760 |
CG2 O |
O2 O |
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VAL | B:220 | B:219 | 20.0 | 0.129 | -98.7 | 128.4 | 20.0 | 0.129 | 0.0 |
HOH |
2.596 |
O |
O |
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4p7i | 1 | P46662 | 99.36 | 0.0 |
X-RAY |
2014-04-09 | VAL | A:223 | A:219 | 18.0 | 0.116 | -96.6 | 125.2 | 18.0 | 0.116 | 0.0 |
HOH |
2.349 |
O |
O |
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VAL | B:223 | B:219 | 19.0 | 0.123 | -111.5 | 118.7 | NA | NA | NA | ||||||||||||||
3u8z | 1 | P35240 | 100.0 | 0.0 |
X-RAY |
2011-11-02 | VAL | A:207 | A:219 | 16.0 | 0.103 | -97.5 | 128.1 | 16.0 | 0.103 | 0.0 |
HOH |
2.708 |
O |
O |
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VAL | B:207 | B:219 | 17.0 | 0.11 | -94.5 | 128.7 | NA | NA | NA | ||||||||||||||
VAL | C:207 | C:219 | 17.0 | 0.11 | -95.8 | 128.1 | 17.0 | 0.11 | 0.0 |
HOH |
2.669 |
O |
O |
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VAL | D:207 | D:219 | 17.0 | 0.11 | -95.2 | 127.9 | NA | NA | NA | ||||||||||||||
3wa0 | 1 | P46662 | 99.32 | 0.0 |
X-RAY |
2014-05-28 | VAL | A:206 | A:219 | 18.0 | 0.116 | -105.2 | 129.8 | 18.0 | 0.116 | 0.0 |
HOH |
2.852 |
O |
O |
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VAL | B:206 | B:219 | 19.0 | 0.123 | -99.1 | 124.2 | NA | NA | NA | ||||||||||||||
VAL | C:206 | C:219 | 17.0 | 0.11 | -100.5 | 124.6 | NA | NA | NA | ||||||||||||||
VAL | D:206 | D:219 | 18.0 | 0.116 | -99.9 | 127.1 | NA | NA | NA | ||||||||||||||
VAL | E:206 | E:219 | 17.0 | 0.11 | -99.5 | 123.4 | NA | NA | NA | ||||||||||||||
VAL | F:206 | F:219 | 18.0 | 0.116 | -108.9 | 128.3 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-p35240-f1 | 1 | P35240 | 100.0 | 0.0 | VAL | A:219 | A:219 | 16.0 | 0.103 | -87.9 | 123.4 |