Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr22 | 41565507 | . | G | A | CCDS14010.1:NM_001429.3:c.4173agG>agA_NP_001420.2:p.1391R>R | Homo sapiens E1A binding protein p300 (EP300), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6gyr | 1 | Q09472 | 94.67 | 0.0 |
X-RAY |
2018-10-17 | ARG | A:347 | A:1391 | 23.0 | 0.102 | T | 63.0 | 38.9 | 23.0 | 0.102 | 0.0 | ||||||
ARG | B:347 | B:1391 | 23.0 | 0.102 | T | 61.5 | 51.8 | NA | NA | NA | |||||||||||||
ARG | C:347 | C:1391 | 26.0 | 0.116 | T | 58.3 | 55.9 | NA | NA | NA | |||||||||||||
ARG | D:347 | D:1391 | 29.0 | 0.129 | T | 54.9 | 56.9 | NA | NA | NA | |||||||||||||
4bhw | 1 | Q09472 | 88.31 | 0.0 |
X-RAY |
2013-08-14 | ARG | A:359 | A:1391 | 24.0 | 0.107 | T | 61.5 | 31.2 | 24.0 | 0.107 | 0.0 |
HOH |
7.215 |
NH1 |
O |
||
ARG | B:359 | B:1391 | 23.0 | 0.102 | T | 65.7 | 38.4 | 23.0 | 0.102 | 0.0 |
HOH |
4.976 |
N |
O |
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5lkt | 1 | Q09472 | 88.31 | 0.0 |
X-RAY |
2016-11-02 | ARG | A:359 | A:1391 | 25.0 | 0.111 | T | 63.2 | 34.5 | 25.0 | 0.111 | 0.0 |
HOH |
3.114 |
NH1 |
O |
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5lku | 1 | Q09472 | 88.31 | 0.0 |
X-RAY |
2016-11-02 | ARG | A:359 | A:1391 | 20.0 | 0.089 | T | 64.2 | 34.2 | 20.0 | 0.089 | 0.0 |
HOH |
8.330 |
NH1 |
O |
||
5lkx | 1 | Q09472 | 88.31 | 0.0 |
X-RAY |
2016-11-02 | ARG | A:359 | A:1391 | 22.0 | 0.098 | T | 64.2 | 34.3 | 22.0 | 0.098 | 0.0 |
HOH |
4.148 |
NH2 |
O |
||
5lkz | 1 | Q09472 | 88.31 | 0.0 |
X-RAY |
2016-11-02 | ARG | A:359 | A:1391 | 26.0 | 0.116 | T | 63.3 | 34.6 | 26.0 | 0.116 | 0.0 |
HOH |
4.673 |
CB |
O |
||
5u7g | 1 | Q8QZV8 | 80.77 | 0.0 |
X-RAY |
2017-06-21 | ARG | A:355 | A:1428 | 36.0 | 0.16 | T | 56.3 | 46.7 | 36.0 | 0.16 | 0.0 |
HOH |
6.732 |
N |
O |
||
ARG | B:355 | B:1428 | 37.0 | 0.164 | T | 57.7 | 48.8 | NA | NA | NA | |||||||||||||
3biy | 1 | Q09472 | 99.47 | 0.0 |
X-RAY |
2008-02-12 | ARG | A:105 | A:1391 | 26.0 | 0.116 | T | 66.3 | 36.4 | 26.0 | 0.116 | 0.0 |
HOH |
3.326 |
NH1 |
O |
||
4pzr | 1 | Q09472 | 99.74 | 0.0 |
X-RAY |
2014-06-11 | ARG | A:105 | A:1391 | 29.0 | 0.129 | T | 55.2 | 37.0 | 29.0 | 0.129 | 0.0 |
HOH |
3.022 |
NH1 |
O |
||
4pzs | 1 | Q09472 | 99.74 | 0.0 |
X-RAY |
2014-06-11 | ARG | A:105 | A:1391 | 34.0 | 0.151 | T | 58.3 | 33.7 | 34.0 | 0.151 | 0.0 |
HOH |
2.596 |
NH2 |
O |
||
4pzt | 1 | Q09472 | 99.74 | 0.0 |
X-RAY |
2014-06-11 | ARG | A:105 | A:1391 | 29.0 | 0.129 | T | 67.7 | 30.8 | 29.0 | 0.129 | 0.0 |
HOH |
6.538 |
NH1 |
O |
||
6v8b | 1 | Q09472 | 91.32 | 0.0 |
X-RAY |
2020-04-01 | ARG | A:106 | A:1391 | 29.0 | 0.129 | T | 61.5 | 58.0 | 29.0 | 0.129 | 0.0 | ||||||
6v8n | 1 | Q09472 | 91.32 | 0.0 |
X-RAY |
2020-04-01 | ARG | A:106 | A:1391 | 28.0 | 0.124 | T | 66.6 | 41.7 | 28.0 | 0.124 | 0.0 |
HOH |
6.518 |
NH1 |
O |
||
6v90 | 1 | Q09472 | 91.32 | 0.0 |
X-RAY |
2020-04-01 | ARG | A:106 | A:1391 | 28.0 | 0.124 | T | 66.3 | 41.2 | 28.0 | 0.124 | 0.0 |
HOH |
6.573 |
NH1 |
O |
||
5kj2 | 1 | Q09472 | 91.05 | 0.0 |
X-RAY |
2017-09-27 | ARG | A:105 | A:1391 | 26.0 | 0.116 | T | 65.1 | 35.4 | 26.0 | 0.116 | 0.0 |
HOH |
3.145 |
NE |
O |
||
7lje | 1 | Q09472 | 91.05 | 0.0 |
X-RAY |
2021-03-17 | ARG | A:105 | A:1391 | 33.0 | 0.147 | T | 61.6 | 38.9 | 33.0 | 0.147 | 0.0 |
HOH |
4.118 |
O |
O |
||
ARG | B:105 | B:1391 | 34.0 | 0.151 | T | 61.7 | 37.0 | NA | NA | NA | |||||||||||||
ARG | C:105 | C:1391 | 33.0 | 0.147 | T | 61.5 | 38.5 | NA | NA | NA | |||||||||||||
ARG | D:105 | D:1391 | 34.0 | 0.151 | T | 61.6 | 37.4 | NA | NA | NA | |||||||||||||
6pgu | 1 | Q09472 | 82.8 | 0.0 |
X-RAY |
2019-10-23 | ARG | A:107 | A:1391 | 25.0 | 0.111 | T | 60.7 | 45.6 | 25.0 | 0.111 | 0.0 |
HOH |
2.971 |
NH1 |
O |
||
ARG | B:107 | B:1391 | 28.0 | 0.124 | T | 62.6 | 37.7 | NA | NA | NA | |||||||||||||
6v8k | 1 | Q09472 | 82.8 | 0.0 |
X-RAY |
2020-04-01 | ARG | A:107 | A:1391 | 30.0 | 0.133 | T | 61.0 | 42.1 | 30.0 | 0.133 | 0.0 |
HOH |
6.755 |
NH1 |
O |
||
6pf1 | 1 | Q09472 | 82.8 | 0.0 |
X-RAY |
2019-10-23 | ARG | A:122 | A:1391 | 22.0 | 0.098 | T | 61.4 | 44.7 | 22.0 | 0.098 | 0.0 |
HOH |
3.154 |
NH1 |
O |
||
ARG | B:122 | B:1391 | 30.0 | 0.133 | T | 60.2 | 42.3 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q09472-f1 | 1 | Q09472 | 100.0 | 0.0 | ARG | A:1391 | A:1391 | 31.0 | 0.138 | T | 57.5 | 39.3 |