Variant
Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr22 | 41572254 | . | T | A | CCDS14010.1:NM_001429.3:c.4783Ttc>Atc_NP_001420.2:p.1595F>I | Homo sapiens E1A binding protein p300 (EP300), mRNA. |
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PDB
Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
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PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
6gyr | 1 | Q09472 | 94.67 | 0.0 |
X-RAY |
2018-10-17 | PHE | A:519 | A:1595 | 13.0 | 0.062 | E | -120.4 | 116.7 | 13.0 | 0.062 | 0.0 |
01K |
5.822 |
HE1 |
HDA |
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PHE | B:519 | B:1595 | 9.0 | 0.043 | E | -106.9 | 142.8 | NA | NA | NA | |||||||||||||
PHE | C:519 | C:1595 | 9.0 | 0.043 | E | -123.2 | 127.3 | NA | NA | NA | |||||||||||||
PHE | D:519 | D:1595 | 9.0 | 0.043 | E | -106.0 | 129.0 | NA | NA | NA | |||||||||||||
4bhw | 1 | Q09472 | 88.31 | 0.0 |
X-RAY |
2013-08-14 | PHE | A:507 | A:1595 | 10.0 | 0.048 | E | -122.0 | 98.6 | 10.0 | 0.048 | 0.0 |
01K HOH |
7.607 7.433 |
CE1 CE1 |
CD O |
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PHE | B:507 | B:1595 | 12.0 | 0.057 | E | -107.8 | 104.6 | 12.0 | 0.057 | 0.0 |
01K |
7.599 |
CE1 |
CD |
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5lkt | 1 | Q09472 | 88.31 | 0.0 |
X-RAY |
2016-11-02 | PHE | A:507 | A:1595 | 12.0 | 0.057 | E | -120.4 | 111.7 | 12.0 | 0.057 | 0.0 |
BCO DMS HOH |
7.386 3.672 3.044 |
CE1 CD1 O |
C25 C1 O |
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5lku | 1 | Q09472 | 88.31 | 0.0 |
X-RAY |
2016-11-02 | PHE | A:507 | A:1595 | 12.0 | 0.057 | E | -119.4 | 111.2 | 12.0 | 0.057 | 0.0 |
COA HOH |
9.757 3.415 |
CE1 CD1 |
S1P O |
||
5lkx | 1 | Q09472 | 88.31 | 0.0 |
X-RAY |
2016-11-02 | PHE | A:507 | A:1595 | 11.0 | 0.052 | E | -120.3 | 110.1 | 11.0 | 0.052 | 0.0 |
1VU DMS HOH |
8.072 3.565 5.035 |
CE1 CD1 CZ |
C C2 O |
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5lkz | 1 | Q09472 | 88.31 | 0.0 |
X-RAY |
2016-11-02 | PHE | A:507 | A:1595 | 12.0 | 0.057 | E | -120.2 | 112.1 | 12.0 | 0.057 | 0.0 |
COO GOL HOH |
7.385 3.702 4.813 |
CE1 CB CZ |
C10 C1 O |
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5u7g | 1 | Q8QZV8 | 80.77 | 0.0 |
X-RAY |
2017-06-21 | PHE | A:503 | A:1633 | 11.0 | 0.052 | E | -118.3 | 118.1 | 11.0 | 0.052 | 0.0 |
HOH |
3.586 |
CD1 |
O |
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PHE | B:503 | B:1633 | 13.0 | 0.062 | E | -116.0 | 118.2 | NA | NA | NA | |||||||||||||
3biy | 1 | Q09472 | 99.47 | 0.0 |
X-RAY |
2008-02-12 | PHE | A:309 | A:1595 | 10.0 | 0.048 | E | -119.9 | 115.1 | 10.0 | 0.048 | 0.0 |
01K HOH |
7.542 3.148 |
CE1 O |
CD O |
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4pzr | 1 | Q09472 | 99.74 | 0.0 |
X-RAY |
2014-06-11 | PHE | A:309 | A:1595 | 10.0 | 0.048 | E | -120.3 | 121.7 | 10.0 | 0.048 | 0.0 |
PEG DMS COA HOH |
7.096 3.574 9.287 2.813 |
CE1 CD1 N O |
H12 S S1P O |
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4pzs | 1 | Q09472 | 99.74 | 0.0 |
X-RAY |
2014-06-11 | PHE | A:309 | A:1595 | 12.0 | 0.057 | E | -123.0 | 116.4 | 12.0 | 0.057 | 0.0 |
ACO DMS HOH |
8.778 3.656 3.292 |
CD1 CD1 O |
O O O |
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4pzt | 1 | Q09472 | 99.74 | 0.0 |
X-RAY |
2014-06-11 | PHE | A:309 | A:1595 | 11.0 | 0.052 | E | -119.7 | 112.8 | 11.0 | 0.052 | 0.0 |
SOP DMS DMS DMS HOH |
8.683 2.731 3.817 3.650 6.560 |
CE1 CD1 CE2 O CE2 |
CA3 H12 H23 O O |
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6v8b | 1 | Q09472 | 91.32 | 0.0 |
X-RAY |
2020-04-01 | PHE | A:278 | A:1595 | 9.0 | 0.043 | E | -119.1 | 108.0 | 9.0 | 0.043 | 0.0 | ||||||
6v8n | 1 | Q09472 | 91.32 | 0.0 |
X-RAY |
2020-04-01 | PHE | A:278 | A:1595 | 10.0 | 0.048 | E | -115.5 | 116.2 | 10.0 | 0.048 | 0.0 |
HOH |
3.111 |
O |
O |
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6v90 | 1 | Q09472 | 91.32 | 0.0 |
X-RAY |
2020-04-01 | PHE | A:278 | A:1595 | 11.0 | 0.052 | E | -118.3 | 113.0 | 11.0 | 0.052 | 0.0 |
HOH |
3.124 |
O |
O |
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5kj2 | 1 | Q09472 | 91.05 | 0.0 |
X-RAY |
2017-09-27 | PHE | A:277 | A:1595 | 9.0 | 0.043 | E | -115.3 | 112.1 | 9.0 | 0.043 | 0.0 |
HOH |
3.254 |
O |
O |
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7lje | 1 | Q09472 | 91.05 | 0.0 |
X-RAY |
2021-03-17 | PHE | A:277 | A:1595 | 10.0 | 0.048 | E | -111.5 | 120.7 | 10.0 | 0.048 | 0.0 |
HOH |
4.101 |
CE2 |
O |
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PHE | B:277 | B:1595 | 11.0 | 0.052 | E | -115.9 | 122.6 | NA | NA | NA | |||||||||||||
PHE | C:277 | C:1595 | 10.0 | 0.048 | E | -109.7 | 120.4 | NA | NA | NA | |||||||||||||
PHE | D:277 | D:1595 | 10.0 | 0.048 | E | -112.3 | 121.9 | NA | NA | NA | |||||||||||||
6pgu | 1 | Q09472 | 82.8 | 0.0 |
X-RAY |
2019-10-23 | PHE | A:255 | A:1595 | 16.0 | 0.076 | E | -120.2 | 103.8 | 16.0 | 0.076 | 0.0 |
COA OK7 HOH |
9.824 3.777 3.200 |
CE1 CD1 O |
S1P CAC O |
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PHE | B:255 | B:1595 | 12.0 | 0.057 | E | -119.5 | 110.6 | NA | NA | NA | |||||||||||||
6v8k | 1 | Q09472 | 82.8 | 0.0 |
X-RAY |
2020-04-01 | PHE | A:255 | A:1595 | 13.0 | 0.062 | E | -116.0 | 118.3 | 13.0 | 0.062 | 0.0 |
QS4 DMS HOH |
7.178 4.036 3.063 |
CE1 CE2 O |
C5 C1 O |
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6pf1 | 1 | Q09472 | 82.8 | 0.0 |
X-RAY |
2019-10-23 | PHE | A:270 | A:1595 | 11.0 | 0.052 | E | -124.2 | 117.7 | 11.0 | 0.052 | 0.0 |
COA OJ7 HOH |
9.911 3.564 7.568 |
CE1 CD1 CD1 |
S1P C6 O |
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PHE | B:270 | B:1595 | 15.0 | 0.071 | E | -122.9 | 107.7 | NA | NA | NA |
AlphaFold DB
Entity | Residue | Monomer | View | ||||||||||
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ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
af-q09472-f1 | 1 | Q09472 | 100.0 | 0.0 | PHE | A:1595 | A:1595 | 12.0 | 0.057 | E | -124.6 | 108.8 |