Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr22 41572288 . C A CCDS14010.1:NM_001429.3:c.4817gCc>gAc_NP_001420.2:p.1606A>D Homo sapiens E1A binding protein p300 (EP300), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
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label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
6gyr 1 Q09472 94.67 0.0 X-RAY
 2018-10-17 ALA A:530 A:1606 28.0 0.243 G -72.4 -9.2 28.0 0.243 0.0
ALA B:530 B:1606 35.0 0.304 H -53.7 -32.0 NA NA NA
ALA C:530 C:1606 39.0 0.339 H -56.2 -25.2 NA NA NA
ALA D:530 D:1606 28.0 0.243 G -83.1 -12.9 NA NA NA
4bhw 1 Q09472 88.31 0.0 X-RAY
 2013-08-14 ALA A:518 A:1606 24.0 0.209 G -76.5 -0.7 24.0 0.209 0.0
ALA B:518 B:1606 56.0 0.487 G -46.2 -36.4 56.0 0.487 0.0 HOH
 7.553
 CB
 O
5lkt 1 Q09472 88.31 0.0 X-RAY
 2016-11-02 ALA A:518 A:1606 26.0 0.226 G -68.5 -10.9 26.0 0.226 0.0 HOH
 2.886
 O
 O
5lku 1 Q09472 88.31 0.0 X-RAY
 2016-11-02 ALA A:518 A:1606 25.0 0.217 G -72.6 -9.1 25.0 0.217 0.0
5lkx 1 Q09472 88.31 0.0 X-RAY
 2016-11-02 ALA A:518 A:1606 25.0 0.217 G -73.4 -8.4 25.0 0.217 0.0 HOH
 5.578
 O
 O
5lkz 1 Q09472 88.31 0.0 X-RAY
 2016-11-02 ALA A:518 A:1606 34.0 0.296 G -68.6 -10.8 34.0 0.296 0.0 HOH
 6.029
 CB
 O
5u7g 1 Q8QZV8 80.77 0.0 X-RAY
 2017-06-21 ILE A:514 NA:NA DO NA DO DO DO NA NA NA
ILE B:514 NA:NA DO NA DO DO DO NA NA NA
3biy 1 Q09472 99.47 0.0 X-RAY
 2008-02-12 ALA A:320 A:1606 31.0 0.27 G -87.4 -8.9 31.0 0.27 0.0 HOH
 4.059
 CB
 O
4pzr 1 Q09472 99.74 0.0 X-RAY
 2014-06-11 ALA A:320 A:1606 21.0 0.183 G -88.7 11.4 21.0 0.183 0.0 HOH
 6.361
 CB
 O
4pzs 1 Q09472 99.74 0.0 X-RAY
 2014-06-11 ALA A:320 A:1606 20.0 0.174 T -77.8 -21.6 20.0 0.174 0.0 HOH
 4.155
 CB
 O
4pzt 1 Q09472 99.74 0.0 X-RAY
 2014-06-11 ALA A:320 A:1606 38.0 0.33 T -67.6 -18.0 38.0 0.33 0.0 HOH
 8.655
 CB
 O
6v8b 1 Q09472 91.32 0.0 X-RAY
 2020-04-01 ALA A:289 A:1606 24.0 0.209 G -85.2 -19.5 24.0 0.209 0.0
6v8n 1 Q09472 91.32 0.0 X-RAY
 2020-04-01 ALA A:289 A:1606 25.0 0.217 G -74.1 -14.4 25.0 0.217 0.0 SO4
 8.844
 N
 O4
6v90 1 Q09472 91.32 0.0 X-RAY
 2020-04-01 ALA A:289 A:1606 24.0 0.209 G -70.2 -21.7 24.0 0.209 0.0 SO4
HOH
 9.178
3.911
 N
CB
 O2
O
5kj2 1 Q09472 91.05 0.0 X-RAY
 2017-09-27 ALA A:288 A:1606 28.0 0.243 G -86.9 -8.9 28.0 0.243 0.0 HOH
 2.688
 O
 O
7lje 1 Q09472 91.05 0.0 X-RAY
 2021-03-17 ALA A:288 A:1606 31.0 0.27 H -67.4 -21.4 31.0 0.27 0.0 HOH
 4.977
 CB
 O
ALA B:288 B:1606 31.0 0.27 H -67.3 -21.3 NA NA NA
ALA C:288 C:1606 31.0 0.27 H -66.8 -21.3 NA NA NA
ALA D:288 D:1606 31.0 0.27 H -67.4 -21.3 NA NA NA
6pgu 1 Q09472 82.8 0.0 X-RAY
 2019-10-23 ALA A:266 A:1606 20.0 0.174 G -88.1 -21.5 20.0 0.174 0.0 HOH
 3.937
 CB
 O
ALA B:266 B:1606 20.0 0.174 H -55.9 -45.2 NA NA NA
6v8k 1 Q09472 82.8 0.0 X-RAY
 2020-04-01 ALA A:266 A:1606 31.0 0.27 G -72.2 -15.2 31.0 0.27 0.0 HOH
 6.815
 CB
 O
6pf1 1 Q09472 82.8 0.0 X-RAY
 2019-10-23 ALA A:281 A:1606 27.0 0.235 G -72.1 -3.2 27.0 0.235 0.0 HOH
 8.533
 O
 O
ALA B:281 B:1606 31.0 0.27 G -67.0 -17.7 NA NA NA

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-q09472-f1 1 Q09472 100.0 0.0 ALA A:1606 A:1606 23.0 0.2 G -70.0 -24.9