Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133467331 . G A CCDS3080.1:NM_001063.3:c.119aGt>aAt_NP_001054.1:p.40S>N Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 SER A:40 A:21 38.0 0.33 H -68.7 -40.0 38.0 0.33 0.0 SO4
HOH
 7.672
3.112
 N
OG
 O2
O
SER B:40 B:21 42.0 0.365 H -61.5 -42.0 NA NA NA
SER C:40 C:21 41.0 0.357 H -60.1 -46.7 NA NA NA
SER D:40 D:21 39.0 0.339 H -60.4 -40.2 NA NA NA
SER E:40 E:21 40.0 0.348 H -65.0 -37.5 NA NA NA
SER F:40 F:21 37.0 0.322 H -62.6 -45.1 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 SER B:40 B:21 31.0 NA -65.4 143.1 31.0 NA NA
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 SER C:40 C:21 46.0 0.4 H -67.2 -40.8 46.0 0.4 0.0
SER D:40 D:21 40.0 0.348 H -66.2 -31.6 40.0 0.348 0.0
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 SER C:40 C:21 47.0 0.409 H -64.2 -37.6 47.0 0.409 0.0
SER D:40 D:21 46.0 0.4 H -64.1 -37.6 46.0 0.4 0.0
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 SER C:40 C:21 43.0 0.374 H -64.4 -36.3 43.0 0.374 0.0
SER D:40 D:21 45.0 0.391 H -64.4 -36.3 45.0 0.391 0.0
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 SER A:40 A:21 46.0 0.4 H -65.3 -49.2 46.0 0.4 0.0
SER B:40 B:21 43.0 0.374 H -65.8 -49.6 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 SER A:40 A:40 37.0 0.322 H -56.2 -47.0 37.0 0.322 0.0 HOH
 7.348
 O
 O
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 SER A:21 A:21 40.0 0.348 H -59.8 -35.9 40.0 0.348 0.0 HOH
 7.385
 O
 O
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 SER A:21 A:21 41.0 0.357 H -59.2 -44.8 41.0 0.357 0.0 HOH
 3.315
 CA
 O
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 SER A:21 A:21 39.0 0.339 H -64.3 -44.4 39.0 0.339 0.0 HOH
 4.788
 N
 O
SER B:21 B:21 39.0 0.339 H -65.0 -43.8 NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 SER A:21 A:21 39.0 0.339 H -58.2 -45.4 39.0 0.339 0.0
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 SER A:21 A:21 46.0 0.4 H -59.4 -46.8 46.0 0.4 0.0 HOH
 3.489
 N
 O
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 SER A:21 A:21 42.0 0.365 H -63.8 -42.8 42.0 0.365 0.0 HOH
 7.019
 O
 O
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 SER A:21 A:21 48.0 0.417 H -66.7 -40.4 48.0 0.417 0.0 HOH
 7.035
 O
 O
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 SER A:21 A:21 42.0 0.365 H -61.1 -41.9 42.0 0.365 0.0 HOH
 8.862
 N
 O
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 SER A:21 A:21 40.0 0.348 H -63.9 -48.7 40.0 0.348 0.0
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 SER A:21 A:21 41.0 0.357 H -54.2 -42.3 41.0 0.357 0.0 HOH
 6.971
 O
 O
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 SER B:21 B:21 44.0 0.383 H -65.1 -41.9 44.0 0.383 0.0 HOH
 7.953
 N
 O
SER D:21 D:21 42.0 0.365 H -64.8 -41.0 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 SER C:19 C:21 39.0 0.339 H -69.8 -38.7 39.0 0.339 0.0
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 SER C:19 C:21 40.0 0.348 H -65.8 -39.6 40.0 0.348 0.0
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 SER A:18 A:21 42.0 0.365 H -64.0 -52.2 42.0 0.365 0.0
SER B:18 B:21 38.0 0.33 H -67.2 -45.7 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 SER C:35 C:21 41.0 0.357 H -77.6 -23.5 41.0 0.357 0.0
SER D:35 D:21 58.0 0.504 H -83.1 -25.6 NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 SER C:35 C:21 35.0 0.304 H -74.6 -22.1 35.0 0.304 0.0
SER D:35 D:21 60.0 0.522 H -83.7 -20.3 NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 SER C:35 C:21 34.0 0.296 H -72.5 -35.3 34.0 0.296 0.0
SER D:35 D:21 67.0 NA H -75.6 -30.1 NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 SER A:18 A:21 34.0 0.296 H -79.5 -32.4 34.0 0.296 0.0
SER B:18 B:21 39.0 0.339 H -58.5 -53.3 NA NA NA
1bp5 1 P02787 100.0 0.0 X-RAY
 1999-01-13 SER A:21 A:21 38.0 0.33 H -69.9 -38.2 38.0 0.33 0.0 HOH
 4.264
 OG
 O
SER B:21 B:21 37.0 0.322 H -74.4 -40.4 NA NA NA
SER C:21 C:21 34.0 0.296 H -70.1 -36.9 NA NA NA
SER D:21 D:21 38.0 0.33 H -70.3 -32.9 NA NA NA
1btj 1 P02787 100.0 0.0 X-RAY
 1999-01-13 SER A:21 A:21 31.0 0.27 H -67.3 -29.3 31.0 0.27 0.0
SER B:21 B:21 34.0 0.296 H -77.8 -22.2 NA NA NA
2o84 1 P02787 99.7 0.0 X-RAY
 2007-01-23 SER A:21 X:21 32.0 0.278 H -56.9 -50.5 32.0 0.278 0.0 HOH
 2.559
 OG
 O
2o7u 1 P02787 99.41 0.0 X-RAY
 2007-01-23 SER A:21 B:21 32.0 0.278 H -90.9 -23.4 32.0 0.278 0.0 HOH
 5.253
 OG
 O
SER B:21 A:21 33.0 0.287 H -88.2 -26.0 NA NA NA
SER C:21 C:21 34.0 0.296 H -91.6 -21.0 NA NA NA
SER D:21 D:21 32.0 0.278 H -85.3 -22.0 NA NA NA
SER E:21 E:21 31.0 0.27 H -84.7 -22.1 NA NA NA
SER F:21 F:21 32.0 0.278 H -89.0 -20.2 NA NA NA
SER G:21 G:21 32.0 0.278 H -81.8 -20.4 NA NA NA
SER H:21 H:21 33.0 0.287 H -82.7 -20.3 NA NA NA
SER I:21 I:21 33.0 0.287 H -81.0 -21.9 NA NA NA
3fgs 1 P02787 99.41 0.0 X-RAY
 2009-05-19 SER A:21 A:21 40.0 0.348 H -61.0 -41.0 40.0 0.348 0.0 HOH
 2.930
 OG
 O
1oqg 1 P02787 99.7 0.0 X-RAY
 2003-03-18 SER A:21 A:21 32.0 0.278 H -63.7 -43.3 32.0 0.278 0.0 HOH
 2.632
 OG
 O
1oqh 1 P02787 99.7 0.0 X-RAY
 2003-03-18 SER A:21 A:21 32.0 0.278 H -69.5 -40.0 32.0 0.278 0.0 HOH
 2.711
 OG
 O
1jqf 1 P02787 99.7 0.0 X-RAY
 2001-10-17 SER A:21 A:21 32.0 0.278 H -66.0 -38.8 32.0 0.278 0.0 HOH
 2.778
 OG
 O
1dtg 1 P02787 99.4 0.0 X-RAY
 2000-01-21 SER A:21 A:21 34.0 0.296 H -67.4 -33.7 34.0 0.296 0.0 HOH
 3.605
 CA
 O
1n84 1 P02787 100.0 0.0 X-RAY
 2003-03-18 SER A:21 A:21 37.0 0.322 H -69.3 -38.2 37.0 0.322 0.0 HOH
 2.736
 OG
 O
1fqe 1 P02787 99.7 0.0 X-RAY
 2001-05-16 SER A:21 A:21 32.0 0.278 H -68.6 -37.9 32.0 0.278 0.0 HOH
 2.835
 OG
 O
1fqf 1 P02787 99.7 0.0 X-RAY
 2001-05-16 SER A:21 A:21 45.0 0.391 H -62.5 -40.7 45.0 0.391 0.0 HOH
 2.931
 OG
 O
1n7x 1 P02787 99.7 0.0 X-RAY
 2003-03-18 SER A:21 A:21 36.0 0.313 H -68.9 -42.6 36.0 0.313 0.0 HOH
 2.825
 OG
 O
1b3e 1 P02787 99.7 0.0 X-RAY
 1999-03-26 SER A:18 A:21 39.0 0.339 H -74.3 -30.8 39.0 0.339 0.0 HOH
 3.474
 OG
 O
1a8e 1 P02787 100.0 0.0 X-RAY
 1998-06-17 SER A:19 A:21 32.0 0.278 H -69.6 -34.2 32.0 0.278 0.0 HOH
 2.823
 OG
 O
1a8f 1 P02787 100.0 0.0 X-RAY
 1998-06-17 SER A:19 A:21 36.0 0.313 H -68.1 -35.8 36.0 0.313 0.0 HOH
 3.796
 CA
 O
1suv 2 P02787 100.0 0.0 EM
 2004-04-13 SER C:19 C:21 32.0 0.278 H -69.6 -34.1 32.0 0.278 0.0
SER D:19 D:21 32.0 0.278 H -69.6 -34.1 32.0 0.278 0.0
1d3k 1 P02787 99.7 0.0 X-RAY
 2000-03-01 SER A:19 A:21 31.0 0.27 H -69.1 -38.5 31.0 0.27 0.0 HOH
 2.812
 OG
 O
1d4n 1 P02787 99.7 0.0 X-RAY
 2000-03-01 SER A:19 A:21 32.0 0.278 H -69.7 -38.6 32.0 0.278 0.0 HOH
 2.715
 OG
 O
1n7w 1 P02787 99.7 0.0 X-RAY
 2003-03-18 SER A:21 A:21 37.0 0.322 H -66.2 -43.9 37.0 0.322 0.0 HOH
 2.789
 OG
 O
1ryo 1 P02787 100.0 0.0 X-RAY
 2004-05-11 SER A:21 A:21 18.0 0.157 H -65.4 -39.5 18.0 0.157 0.0 HOH
 2.830
 OG
 O
1tfd 1 P19134 82.57 0.0 X-RAY
 1993-04-15 ASN A:21 A:21 53.0 0.331 H -68.8 -47.7 53.0 0.331 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 SER A:40 A:40 42.0 0.365 H -59.5 -42.0