Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133467337 . G A CCDS3080.1:NM_001063.3:c.125cGc>cAc_NP_001054.1:p.42R>H Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 ARG A:42 A:23 68.0 0.302 H -57.7 -48.3 68.0 0.302 0.0 SO4
HOH
 2.770
2.977
 NE
O
 O2
O
ARG B:42 B:23 67.0 0.298 H -58.1 -53.2 NA NA NA
ARG C:42 C:23 73.0 0.324 H -56.7 -47.9 NA NA NA
ARG D:42 D:23 70.0 0.311 H -59.5 -47.7 NA NA NA
ARG E:42 E:23 75.0 0.333 H -58.9 -52.6 NA NA NA
ARG F:42 F:23 74.0 0.329 H -60.0 -49.7 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 ARG B:42 B:23 76.0 NA S -109.4 4.2 76.0 NA NA HOH
 7.855
 O
 O
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 ARG C:42 C:23 72.0 0.32 H -70.9 -47.6 66.0 0.293 0.027 E:A5K736:0.027
ARG D:42 D:23 102.0 0.453 H -67.0 -45.0 102.0 0.453 0.0
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 ARG C:42 C:23 95.0 0.422 H -65.0 -46.1 95.0 0.422 0.0
ARG D:42 D:23 95.0 0.422 H -64.9 -46.1 95.0 0.422 0.0
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 ARG C:42 C:23 81.0 0.36 H -65.3 -47.4 80.0 0.356 0.004 F:A5K736:0.004
ARG D:42 D:23 80.0 0.356 H -65.3 -47.4 80.0 0.356 0.0
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 ARG A:42 A:23 80.0 0.356 H -61.4 -64.3 80.0 0.356 0.0
ARG B:42 B:23 86.0 0.382 H -59.9 -61.8 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 ARG A:42 A:42 64.0 0.284 H -52.8 -46.0 64.0 0.284 0.0 HOH
 2.779
 O
 O
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 ARG A:23 A:23 79.0 0.351 H -60.2 -56.3 79.0 0.351 0.0 HOH
 2.811
 O
 O
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 ARG A:23 A:23 69.0 0.307 H -48.6 -51.1 69.0 0.307 0.0 HOH
 2.939
 O
 O
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 ARG A:23 A:23 69.0 0.307 H -56.7 -46.9 69.0 0.307 0.0 HOH
 2.923
 O
 O
ARG B:23 B:23 69.0 0.307 H -57.6 -46.4 NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 ARG A:23 A:23 70.0 0.311 H -46.2 -51.0 70.0 0.311 0.0
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 ARG A:23 A:23 65.0 0.289 H -59.0 -44.3 65.0 0.289 0.0 HOH
 2.910
 O
 O
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 ARG A:23 A:23 74.0 0.329 H -63.7 -41.6 74.0 0.329 0.0 HOH
 2.896
 O
 O
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 ARG A:23 A:23 77.0 0.342 H -56.8 -47.0 77.0 0.342 0.0 HOH
 2.734
 O
 O
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 ARG A:23 A:23 80.0 0.356 H -54.4 -50.6 80.0 0.356 0.0 HOH
 2.944
 NH2
 O
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 ARG A:23 A:23 72.0 0.32 H -55.1 -50.5 72.0 0.32 0.0
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 ARG A:23 A:23 89.0 0.396 H -62.4 -45.1 89.0 0.396 0.0 HOH
 2.711
 O
 O
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 ARG B:23 B:23 65.0 0.289 H -49.8 -53.2 65.0 0.289 0.0 HOH
 3.592
 NH1
 O
ARG D:23 D:23 67.0 0.298 H -50.5 -52.9 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 ARG C:21 C:23 56.0 0.249 H -58.8 -49.6 56.0 0.249 0.0
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 ARG C:21 C:23 65.0 0.289 H -58.5 -54.0 65.0 0.289 0.0
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 ARG A:20 A:23 90.0 0.4 H -42.9 -50.8 90.0 0.4 0.0
ARG B:20 B:23 82.0 0.364 H -52.2 -50.0 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ARG C:37 C:23 34.0 NA H -87.1 -58.9 34.0 NA NA
ARG D:37 D:23 107.0 0.476 H -88.3 -35.3 NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ARG C:37 C:23 99.0 0.44 H -82.8 -56.7 99.0 0.44 0.0
ARG D:37 D:23 44.0 NA H -87.5 -41.0 NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ARG C:37 C:23 19.0 NA H -72.4 -32.2 19.0 NA NA
ARG D:37 D:23 52.0 NA H -76.3 -42.5 NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 ARG A:20 A:23 92.0 0.409 H -74.2 -43.3 92.0 0.409 0.0
ARG B:20 B:23 84.0 0.373 H -69.6 -40.8 NA NA NA
1bp5 1 P02787 100.0 0.0 X-RAY
 1999-01-13 ARG A:23 A:23 78.0 0.347 H -51.6 -54.1 78.0 0.347 0.0 HOH
 2.559
 NH1
 O
ARG B:23 B:23 78.0 0.347 H -56.6 -58.0 NA NA NA
ARG C:23 C:23 76.0 0.338 H -58.0 -47.7 NA NA NA
ARG D:23 D:23 76.0 0.338 H -61.8 -53.2 NA NA NA
1btj 1 P02787 100.0 0.0 X-RAY
 1999-01-13 ARG A:23 A:23 74.0 0.329 H -65.8 -65.4 74.0 0.329 0.0
ARG B:23 B:23 76.0 0.338 H -68.4 -63.1 NA NA NA
2o84 1 P02787 99.7 0.0 X-RAY
 2007-01-23 ARG A:23 X:23 95.0 0.422 H -55.8 -49.0 95.0 0.422 0.0 HOH
 4.754
 NH1
 O
2o7u 1 P02787 99.41 0.0 X-RAY
 2007-01-23 ARG A:23 B:23 72.0 0.32 H -52.3 -47.7 72.0 0.32 0.0 HOH
 9.557
 N
 O
ARG B:23 A:23 72.0 0.32 H -48.6 -50.1 NA NA NA
ARG C:23 C:23 73.0 0.324 H -46.5 -50.5 NA NA NA
ARG D:23 D:23 71.0 0.316 H -54.4 -50.4 NA NA NA
ARG E:23 E:23 72.0 0.32 H -53.1 -51.8 NA NA NA
ARG F:23 F:23 70.0 0.311 H -55.4 -51.3 NA NA NA
ARG G:23 G:23 69.0 0.307 H -55.6 -53.0 NA NA NA
ARG H:23 H:23 71.0 0.316 H -55.2 -52.2 NA NA NA
ARG I:23 I:23 68.0 0.302 H -54.9 -52.4 NA NA NA
3fgs 1 P02787 99.41 0.0 X-RAY
 2009-05-19 ARG A:23 A:23 77.0 0.342 H -51.9 -54.3 77.0 0.342 0.0 HOH
 2.994
 O
 O
1oqg 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ARG A:23 A:23 101.0 0.449 H -54.9 -53.3 101.0 0.449 0.0 HOH
 3.111
 O
 O
1oqh 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ARG A:23 A:23 73.0 0.324 H -66.3 -44.5 73.0 0.324 0.0 HOH
 4.027
 NH2
 O
1jqf 1 P02787 99.7 0.0 X-RAY
 2001-10-17 ARG A:23 A:23 78.0 0.347 H -66.9 -39.3 78.0 0.347 0.0 HOH
 3.129
 O
 O
1dtg 1 P02787 99.4 0.0 X-RAY
 2000-01-21 ARG A:23 A:23 71.0 0.316 H -63.9 -50.1 71.0 0.316 0.0 HOH
 2.679
 NH1
 O
1n84 1 P02787 100.0 0.0 X-RAY
 2003-03-18 ARG A:23 A:23 48.0 0.213 H -60.3 -51.2 48.0 0.213 0.0 HOH
 2.714
 NH1
 O
1fqe 1 P02787 99.7 0.0 X-RAY
 2001-05-16 ARG A:23 A:23 69.0 0.307 H -59.5 -51.4 69.0 0.307 0.0 HOH
 2.963
 O
 O
1fqf 1 P02787 99.7 0.0 X-RAY
 2001-05-16 ARG A:23 A:23 63.0 0.28 H -55.6 -49.3 63.0 0.28 0.0 HOH
 2.692
 O
 O
1n7x 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ARG A:23 A:23 68.0 0.302 H -53.6 -49.2 68.0 0.302 0.0 HOH
 2.822
 O
 O
1b3e 1 P02787 99.7 0.0 X-RAY
 1999-03-26 ARG A:20 A:23 70.0 0.311 H -48.0 -54.2 70.0 0.311 0.0 HOH
 2.758
 O
 O
1a8e 1 P02787 100.0 0.0 X-RAY
 1998-06-17 ARG A:21 A:23 76.0 0.338 H -61.7 -47.8 76.0 0.338 0.0 HOH
 3.055
 O
 O
1a8f 1 P02787 100.0 0.0 X-RAY
 1998-06-17 ARG A:21 A:23 77.0 0.342 H -55.6 -48.3 77.0 0.342 0.0 HOH
 2.813
 NH1
 O
1suv 2 P02787 100.0 0.0 EM
 2004-04-13 ARG C:21 C:23 75.0 0.333 H -61.7 -47.7 75.0 0.333 0.0
ARG D:21 D:23 76.0 0.338 H -61.7 -47.8 76.0 0.338 0.0
1d3k 1 P02787 99.7 0.0 X-RAY
 2000-03-01 ARG A:21 A:23 70.0 0.311 H -56.4 -52.5 70.0 0.311 0.0 HOH
 2.636
 NH1
 O
1d4n 1 P02787 99.7 0.0 X-RAY
 2000-03-01 ARG A:21 A:23 70.0 0.311 H -53.0 -52.9 70.0 0.311 0.0 HOH
 2.919
 O
 O
1n7w 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ARG A:23 A:23 65.0 0.289 H -59.7 -62.4 65.0 0.289 0.0 HOH
 3.111
 NH2
 O
1ryo 1 P02787 100.0 0.0 X-RAY
 2004-05-11 ARG A:23 A:23 89.0 0.396 H -59.6 -50.2 89.0 0.396 0.0 HOH
 3.029
 O
 O
1tfd 1 P19134 82.57 0.0 X-RAY
 1993-04-15 ARG A:23 A:23 97.0 0.431 H -62.5 -60.6 97.0 0.431 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 ARG A:42 A:42 71.0 0.316 H -56.1 -49.4