Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133472503 . A C CCDS3080.1:NM_001063.3:c.281aAt>aCt_NP_001054.1:p.94N>T Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 ASN A:94 A:75 27.0 0.169 T -75.5 -49.2 27.0 0.169 0.0 SO4
P6G
P6G
HOH
 9.847
7.979
8.385
2.814
 O
OD1
ND2
OD1
 O3
C15
C12
O
ASN B:94 B:75 27.0 0.169 T -76.4 -44.6 NA NA NA
ASN C:94 C:75 26.0 0.163 T -66.3 -54.3 NA NA NA
ASN D:94 D:75 27.0 0.169 T -64.0 -52.9 NA NA NA
ASN E:94 E:75 28.0 0.175 T -67.6 -46.1 NA NA NA
ASN F:94 F:75 26.0 0.163 T -70.6 -52.3 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 ASN B:94 B:75 16.0 0.1 S -90.5 64.1 16.0 0.1 0.0
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 ASN C:94 C:75 32.0 0.2 -94.3 -59.2 13.0 0.081 0.119 A:P02786:0.119
ASN D:94 D:75 24.0 0.15 T -79.4 -53.8 10.0 0.062 0.088 B:P02786:0.087
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 ASN C:94 C:75 30.0 0.188 T -73.8 -51.8 17.0 0.106 0.082 A:P02786:0.081
ASN D:94 D:75 32.0 0.2 T -73.8 -51.9 18.0 0.113 0.087 B:P02786:0.087
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 ASN C:94 C:75 22.0 0.138 T -72.8 -49.3 6.0 0.037 0.101 A:P02786:0.1
ASN D:94 D:75 22.0 0.138 T -72.8 -49.3 6.0 0.037 0.101 B:P02786:0.1
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 ASN A:94 A:75 27.0 0.169 T -63.9 -60.5 27.0 0.169 0.0
ASN B:94 B:75 32.0 0.2 T -65.3 -62.1 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 ASN A:94 A:94 25.0 0.156 T -84.5 -47.7 25.0 0.156 0.0 HOH
 7.681
 CB
 O
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 ASN A:75 A:75 32.0 0.2 T -74.8 -46.5 32.0 0.2 0.0 HOH
 5.722
 C
 O
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 ASN A:75 A:75 25.0 0.156 T -81.2 -54.4 25.0 0.156 0.0 HOH
 2.855
 O
 O
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 ASN A:75 A:75 23.0 0.144 T -85.1 -43.0 23.0 0.144 0.0
ASN B:75 B:75 25.0 0.156 T -85.0 -42.5 NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 ASN A:75 A:75 27.0 0.169 T -82.3 -53.6 27.0 0.169 0.0
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 ASN A:75 A:75 28.0 0.175 T -77.3 -59.5 28.0 0.175 0.0 HOH
 2.696
 O
 O
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 ASN A:75 A:75 32.0 0.2 T -77.2 -57.8 32.0 0.2 0.0 HOH
 7.709
 CB
 O
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 ASN A:75 A:75 25.0 0.156 T -84.8 -49.1 25.0 0.156 0.0 HOH
 3.107
 O
 O
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 ASN A:75 A:75 19.0 0.119 T -74.0 -58.5 19.0 0.119 0.0
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 ASN A:75 A:75 24.0 0.15 T -80.1 -47.5 24.0 0.15 0.0
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 ASN A:75 A:75 30.0 0.188 T -77.0 -43.6 30.0 0.188 0.0 HOH
 8.060
 C
 O
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 ASN B:75 B:75 32.0 0.2 T -86.3 -43.1 32.0 0.2 0.0 HOH
 2.668
 OD1
 O
ASN D:75 D:75 31.0 0.194 T -66.8 -43.9 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 ASN C:73 C:75 26.0 0.163 T -79.5 -45.3 26.0 0.163 0.0
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 ASN C:73 C:75 22.0 0.138 T -69.2 -53.0 22.0 0.138 0.0
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 ASN A:72 A:75 32.0 0.2 T -71.4 -52.1 32.0 0.2 0.0
ASN B:72 B:75 34.0 0.212 T -75.8 -61.8 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ASN C:89 C:75 28.0 0.175 T -50.5 -46.8 9.0 0.056 0.119 A:P02786:0.119
ASN D:89 D:75 24.0 0.15 T -48.8 -47.9 NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ASN C:89 C:75 25.0 0.156 T -74.1 -44.8 9.0 0.056 0.1 A:P02786:0.1
ASN D:89 D:75 29.0 0.181 T -61.2 -41.2 NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ASN C:89 C:75 32.0 0.2 T -73.1 -49.5 14.0 0.087 0.113 A:P02786:0.113
ASN D:89 D:75 45.0 0.281 T -74.6 -52.9 NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 ASN A:72 A:75 25.0 0.156 T -55.3 -54.1 25.0 0.156 0.0
ASN B:72 B:75 33.0 0.206 T -92.3 -46.0 NA NA NA
1bp5 1 P02787 100.0 0.0 X-RAY
 1999-01-13 ASN A:75 A:75 25.0 0.156 T -70.7 -49.5 25.0 0.156 0.0 HOH
 2.958
 O
 O
ASN B:75 B:75 33.0 0.206 T -66.0 -66.3 NA NA NA
ASN C:75 C:75 33.0 0.206 T -77.7 -49.7 NA NA NA
ASN D:75 D:75 33.0 0.206 T -80.5 -55.0 NA NA NA
1btj 1 P02787 100.0 0.0 X-RAY
 1999-01-13 ASN A:75 A:75 12.0 0.075 T -90.3 -34.2 12.0 0.075 0.0
ASN B:75 B:75 13.0 0.081 T -89.0 -28.4 NA NA NA
2o84 1 P02787 99.7 0.0 X-RAY
 2007-01-23 ASN A:75 X:75 50.0 0.312 T -89.2 -51.8 50.0 0.312 0.0 HOH
 3.070
 OD1
 O
2o7u 1 P02787 99.41 0.0 X-RAY
 2007-01-23 ASN A:75 B:75 28.0 0.175 T -70.9 -50.5 28.0 0.175 0.0
ASN B:75 A:75 29.0 0.181 T -71.8 -51.4 NA NA NA
ASN C:75 C:75 28.0 0.175 T -72.7 -50.5 NA NA NA
ASN D:75 D:75 27.0 0.169 T -74.5 -46.9 NA NA NA
ASN E:75 E:75 29.0 0.181 T -75.0 -46.4 NA NA NA
ASN F:75 F:75 29.0 0.181 T -74.3 -48.0 NA NA NA
ASN G:75 G:75 30.0 0.188 T -75.5 -48.2 NA NA NA
ASN H:75 H:75 29.0 0.181 T -77.2 -47.6 NA NA NA
ASN I:75 I:75 29.0 0.181 T -75.5 -46.5 NA NA NA
3fgs 1 P02787 99.41 0.0 X-RAY
 2009-05-19 ASN A:75 A:75 33.0 0.206 T -91.5 -42.0 33.0 0.206 0.0 HOH
 2.518
 ND2
 O
1oqg 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ASN A:75 A:75 54.0 0.338 T -86.1 -49.6 54.0 0.338 0.0 HOH
 2.720
 OD1
 O
1oqh 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ASN A:75 A:75 55.0 0.344 T -95.2 -44.3 55.0 0.344 0.0 HOH
 3.213
 O
 O
1jqf 1 P02787 99.7 0.0 X-RAY
 2001-10-17 ASN A:75 A:75 49.0 0.306 T -87.5 -42.7 49.0 0.306 0.0 HOH
 2.790
 OD1
 O
1dtg 1 P02787 99.4 0.0 X-RAY
 2000-01-21 ASN A:75 A:75 29.0 0.181 T -74.4 -61.5 29.0 0.181 0.0 HOH
 6.063
 OD1
 O
1n84 1 P02787 100.0 0.0 X-RAY
 2003-03-18 ASN A:75 A:75 25.0 0.156 T -82.5 -48.9 25.0 0.156 0.0 HOH
 4.311
 ND2
 O
1fqe 1 P02787 99.7 0.0 X-RAY
 2001-05-16 ASN A:75 A:75 49.0 0.306 T -83.4 -47.6 49.0 0.306 0.0 HOH
 2.431
 O
 O
1fqf 1 P02787 99.7 0.0 X-RAY
 2001-05-16 ASN A:75 A:75 32.0 0.2 T -76.8 -54.5 32.0 0.2 0.0 HOH
 2.964
 OD1
 O
1n7x 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ASN A:75 A:75 20.0 0.125 T -83.8 -53.8 20.0 0.125 0.0 HOH
 3.237
 O
 O
1b3e 1 P02787 99.7 0.0 X-RAY
 1999-03-26 ASN A:72 A:75 25.0 0.156 T -68.3 -55.9 25.0 0.156 0.0 HOH
 8.819
 O
 O
1a8e 1 P02787 100.0 0.0 X-RAY
 1998-06-17 ASN A:73 A:75 22.0 0.138 T -83.2 -48.6 22.0 0.138 0.0 HOH
 2.537
 ND2
 O
1a8f 1 P02787 100.0 0.0 X-RAY
 1998-06-17 ASN A:73 A:75 26.0 0.163 T -88.1 -42.7 26.0 0.163 0.0 HOH
 2.440
 OD1
 O
1suv 2 P02787 100.0 0.0 EM
 2004-04-13 ASN C:73 C:75 22.0 0.138 T -83.2 -48.6 16.0 0.1 0.038 A:P02786:0.037
ASN D:73 D:75 22.0 0.138 T -83.2 -48.7 17.0 0.106 0.032 B:P02786:0.031
1d3k 1 P02787 99.7 0.0 X-RAY
 2000-03-01 ASN A:73 A:75 22.0 0.138 T -81.8 -48.2 22.0 0.138 0.0 HOH
 4.437
 ND2
 O
1d4n 1 P02787 99.7 0.0 X-RAY
 2000-03-01 ASN A:73 A:75 23.0 0.144 T -77.6 -51.0 23.0 0.144 0.0 HOH
 4.292
 ND2
 O
1n7w 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ASN A:75 A:75 38.0 0.237 T -76.0 -50.6 38.0 0.237 0.0 HOH
 3.161
 O
 O
1ryo 1 P02787 100.0 0.0 X-RAY
 2004-05-11 ASN A:75 A:75 23.0 0.144 T -86.5 -45.8 23.0 0.144 0.0 HOH
 2.560
 O
 O
1tfd 1 P19134 82.57 0.0 X-RAY
 1993-04-15 ASN A:75 A:75 104.0 0.65 T 142.1 71.6 104.0 0.65 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 ASN A:94 A:94 28.0 0.175 T -69.0 -44.6