Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133472533 . A C CCDS3080.1:NM_001063.3:c.311tAt>tCt_NP_001054.1:p.104Y>S Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 TYR A:104 A:85 4.0 0.017 E -121.2 -179.6 4.0 0.017 0.0 BCT
FE
SO4
HOH
 8.135
6.316
7.101
3.213
 OH
OH
C
CB
 O1
FE
O4
O
TYR B:104 B:85 4.0 0.017 E -123.1 178.5 NA NA NA
TYR C:104 C:85 4.0 0.017 E -117.0 -177.0 NA NA NA
TYR D:104 D:85 4.0 0.017 E -124.4 -177.8 NA NA NA
TYR E:104 E:85 4.0 0.017 E -126.7 -174.1 NA NA NA
TYR F:104 F:85 4.0 0.017 B -119.6 -177.0 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 TYR B:104 B:85 26.0 0.113 -118.3 162.4 26.0 0.113 0.0 HOH
 3.398
 CD1
 O
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 TYR C:104 C:85 20.0 0.087 -119.8 -18.2 20.0 0.087 0.0 FE
CO3
 5.779
7.596
 OH
OH
 FE
O1
TYR D:104 D:85 18.0 0.078 -118.7 -21.1 18.0 0.078 0.0 FE
CO3
 6.075
7.749
 OH
OH
 FE
O3
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 TYR C:104 C:85 18.0 0.078 -119.0 -15.2 18.0 0.078 0.0 FE
CO3
 5.863
7.745
 OH
OH
 FE
O3
TYR D:104 D:85 19.0 0.083 -118.9 -15.2 19.0 0.083 0.0 FE
CO3
 5.863
7.724
 OH
OH
 FE
O3
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 TYR C:104 C:85 16.0 0.07 -112.4 -14.5 16.0 0.07 0.0 FE
CO3
 5.848
7.117
 OH
OH
 FE
O3
TYR D:104 D:85 16.0 0.07 -112.4 -14.4 16.0 0.07 0.0 FE
CO3
 5.859
7.133
 OH
OH
 FE
O3
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 TYR A:104 A:85 33.0 0.143 S -121.9 9.6 33.0 0.143 0.0 CIT
 8.356
 OH
 O3
TYR B:104 B:85 36.0 0.157 -121.0 9.8 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 TYR A:104 A:104 25.0 0.109 -129.1 152.0 25.0 0.109 0.0 HOH
 4.116
 CE1
 O
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 TYR A:85 A:85 45.0 0.196 -133.6 -5.1 45.0 0.196 0.0 FE
SO4
 9.272
8.406
 OH
OH
 FE
O2
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 TYR A:85 A:85 28.0 0.122 B -134.4 175.8 28.0 0.122 0.0 HOH
 3.454
 CD2
 O
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 TYR A:85 A:85 27.0 0.117 E -133.4 178.0 27.0 0.117 0.0 HOH
 3.894
 CE1
 O
TYR B:85 B:85 35.0 0.152 -130.8 -21.1 NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 TYR A:85 A:85 29.0 0.126 B -129.1 164.3 29.0 0.126 0.0 CIT
HOH
 7.728
4.508
 OH
CE2
 O1
O
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 TYR A:85 A:85 28.0 0.122 B -136.0 170.5 28.0 0.122 0.0 HOH
 3.662
 CD1
 O
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 TYR A:85 A:85 31.0 0.135 E -134.6 178.3 31.0 0.135 0.0 CIT
HOH
 7.885
4.365
 OH
CE2
 O3
O
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 TYR A:85 A:85 36.0 0.157 -132.3 -10.5 36.0 0.157 0.0 NTA
HOH
 7.927
4.344
 OH
CE1
 C6
O
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 TYR A:85 A:85 26.0 0.113 B -130.4 165.6 26.0 0.113 0.0 HOH
 4.109
 CE1
 O
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 TYR A:85 A:85 28.0 0.122 B -134.2 -179.5 28.0 0.122 0.0 8R6
HOH
 6.214
9.400
 OH
OH
 C21
O
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 TYR A:85 A:85 38.0 0.165 -138.7 6.0 38.0 0.165 0.0 POP
HOH
 7.879
4.151
 OH
CE1
 O1
O
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 TYR B:85 B:85 24.0 0.104 E -129.0 150.3 24.0 0.104 0.0 GOL
HOH
 6.022
6.045
 OH
CE2
 O3
O
TYR D:85 D:85 26.0 0.113 E -126.3 148.8 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 TYR C:83 C:85 27.0 0.117 -128.1 150.8 27.0 0.117 0.0 HOH
 8.115
 O
 O
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 TYR C:83 C:85 31.0 0.135 -126.0 145.1 31.0 0.135 0.0
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 TYR A:82 A:85 43.0 0.187 -128.7 42.6 43.0 0.187 0.0 CIT
 7.312
 OH
 O1
TYR B:82 B:85 34.0 0.148 -118.7 -35.8 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 TYR C:99 C:85 7.0 0.03 E -113.3 153.8 7.0 0.03 0.0 FE
CO3
 5.683
6.893
 OH
OH
 FE
O2
TYR D:99 D:85 30.0 0.13 E -102.6 132.5 NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 TYR C:99 C:85 10.0 0.043 E -109.2 146.5 10.0 0.043 0.0 CO3
FE
 7.132
5.473
 OH
OH
 O2
FE
TYR D:99 D:85 33.0 0.143 E -103.8 135.6 NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 TYR C:99 C:85 5.0 0.022 E -113.5 169.2 5.0 0.022 0.0 FE
CO3
 6.156
8.125
 OH
OH
 FE
O1
TYR D:99 NA:NA DO NA DO DO DO NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 TYR A:82 A:85 36.0 0.157 S -129.2 43.0 36.0 0.157 0.0
TYR B:82 B:85 46.0 0.2 S -130.5 2.5 NA NA NA
1bp5 1 P02787 100.0 0.0 X-RAY
 1999-01-13 TYR A:85 A:85 31.0 0.135 E -140.7 178.6 31.0 0.135 0.0 HOH
 3.699
 CD1
 O
TYR B:85 B:85 31.0 0.135 E -136.0 179.0 NA NA NA
TYR C:85 C:85 28.0 0.122 B -141.5 178.5 NA NA NA
TYR D:85 D:85 27.0 0.117 B -134.7 -178.6 NA NA NA
1btj 1 P02787 100.0 0.0 X-RAY
 1999-01-13 TYR A:85 A:85 29.0 0.126 B -134.2 172.7 29.0 0.126 0.0
TYR B:85 B:85 27.0 0.117 E -135.6 172.6 NA NA NA
2o84 1 P02787 99.7 0.0 X-RAY
 2007-01-23 TYR A:85 X:85 6.0 0.026 E -124.7 174.9 6.0 0.026 0.0 FE
CO3
HOH
 6.525
8.461
3.905
 OH
OH
CB
 FE
O1
O
2o7u 1 P02787 99.41 0.0 X-RAY
 2007-01-23 TYR A:85 B:85 7.0 0.03 E -113.8 -161.0 7.0 0.03 0.0 FE
CO3
HOH
 6.215
8.047
3.213
 OH
OH
CE1
 FE
O3
O
TYR B:85 A:85 8.0 0.035 E -117.0 -164.6 NA NA NA
TYR C:85 C:85 7.0 0.03 E -114.1 -161.9 NA NA NA
TYR D:85 D:85 5.0 0.022 E -121.1 -173.1 NA NA NA
TYR E:85 E:85 5.0 0.022 E -120.0 -173.7 NA NA NA
TYR F:85 F:85 4.0 0.017 E -119.2 -174.0 NA NA NA
TYR G:85 G:85 4.0 0.017 E -121.5 -172.5 NA NA NA
TYR H:85 H:85 5.0 0.022 E -122.9 -172.1 NA NA NA
TYR I:85 I:85 4.0 0.017 E -121.3 -172.0 NA NA NA
3fgs 1 P02787 99.41 0.0 X-RAY
 2009-05-19 TYR A:85 A:85 2.0 0.009 B -128.1 -169.8 2.0 0.009 0.0 CO3
FE
HOH
 8.566
6.518
3.466
 OH
OH
CB
 O1
FE
O
1oqg 1 P02787 99.7 0.0 X-RAY
 2003-03-18 TYR A:85 A:85 3.0 0.013 E -122.3 -169.5 3.0 0.013 0.0 CO3
FE
HOH
 8.303
6.557
3.218
 OH
OH
CB
 O2
FE
O
1oqh 1 P02787 99.7 0.0 X-RAY
 2003-03-18 TYR A:85 A:85 3.0 0.013 E -119.2 -171.3 3.0 0.013 0.0 CO3
FE
HOH
 7.938
6.290
3.513
 OH
OH
CB
 O2
FE
O
1jqf 1 P02787 99.7 0.0 X-RAY
 2001-10-17 TYR A:85 A:85 3.0 0.013 E -121.5 -168.5 3.0 0.013 0.0 CO3
FE
HOH
 8.366
6.508
3.282
 OH
OH
CB
 O3
FE
O
1dtg 1 P02787 99.4 0.0 X-RAY
 2000-01-21 TYR A:85 A:85 6.0 0.026 E -124.8 -175.5 6.0 0.026 0.0 FE
CO3
HOH
 6.207
7.893
3.270
 OH
OH
CB
 FE
O2
O
1n84 1 P02787 100.0 0.0 X-RAY
 2003-03-18 TYR A:85 A:85 3.0 0.013 E -119.5 -176.8 3.0 0.013 0.0 CO3
FE
HOH
 7.935
6.282
3.206
 OH
OH
CB
 O2
FE
O
1fqe 1 P02787 99.7 0.0 X-RAY
 2001-05-16 TYR A:85 A:85 4.0 0.017 B -125.2 -174.2 4.0 0.017 0.0 FE
CO3
HOH
 6.780
8.659
3.306
 OH
OH
CB
 FE
O3
O
1fqf 1 P02787 99.7 0.0 X-RAY
 2001-05-16 TYR A:85 A:85 5.0 0.022 E -114.8 -169.9 5.0 0.022 0.0 FE
CO3
HOH
 6.046
7.777
3.011
 OH
OH
OH
 FE
O3
O
1n7x 1 P02787 99.7 0.0 X-RAY
 2003-03-18 TYR A:85 A:85 4.0 0.017 E -121.8 -174.8 4.0 0.017 0.0 CO3
FE
HOH
 7.833
6.248
3.278
 OH
OH
CB
 O1
FE
O
1b3e 1 P02787 99.7 0.0 X-RAY
 1999-03-26 TYR A:82 A:85 7.0 0.03 E -114.0 175.6 7.0 0.03 0.0 FE
CO3
HOH
 6.232
7.964
3.331
 OH
OH
CB
 FE
O2
O
1a8e 1 P02787 100.0 0.0 X-RAY
 1998-06-17 TYR A:83 A:85 4.0 0.017 B -121.0 -175.7 4.0 0.017 0.0 CO3
FE
HOH
 7.508
6.388
3.115
 OH
OH
CB
 O2
FE
O
1a8f 1 P02787 100.0 0.0 X-RAY
 1998-06-17 TYR A:83 A:85 4.0 0.017 E -119.9 175.2 4.0 0.017 0.0 CO3
FE
HOH
 7.345
6.379
3.211
 OH
OH
CB
 O2
FE
O
1suv 2 P02787 100.0 0.0 EM
 2004-04-13 TYR C:83 C:85 4.0 0.017 B -121.0 -175.7 4.0 0.017 0.0 CO3
FE
 7.508
6.389
 OH
OH
 O2
FE
TYR D:83 D:85 4.0 0.017 B -121.0 -175.7 4.0 0.017 0.0 CO3
FE
 7.508
6.388
 OH
OH
 O2
FE
1d3k 1 P02787 99.7 0.0 X-RAY
 2000-03-01 TYR A:83 A:85 4.0 0.017 B -120.8 -170.2 4.0 0.017 0.0 CO3
FE
HOH
 8.197
6.432
3.480
 OH
OH
CB
 O1
FE
O
1d4n 1 P02787 99.7 0.0 X-RAY
 2000-03-01 TYR A:83 A:85 3.0 0.013 B -120.3 -170.0 3.0 0.013 0.0 CO3
FE
HOH
 8.310
6.364
3.325
 OH
OH
CB
 O1
FE
O
1n7w 1 P02787 99.7 0.0 X-RAY
 2003-03-18 TYR A:85 A:85 5.0 0.022 E -120.4 179.5 5.0 0.022 0.0 CO3
FE
HOH
 8.447
6.376
3.487
 OH
OH
CB
 O1
FE
O
1ryo 1 P02787 100.0 0.0 X-RAY
 2004-05-11 TYR A:85 A:85 3.0 0.013 E -119.1 -174.8 3.0 0.013 0.0 OXL
FE
HOH
 7.739
6.366
3.265
 OH
OH
CB
 O1
FE
O
1tfd 1 P19134 82.57 0.0 X-RAY
 1993-04-15 TYR A:85 A:85 12.0 0.052 -62.4 31.0 12.0 0.052 0.0 CO3
FE
 7.787
6.187
 OH
OH
 O3
FE

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 TYR A:104 A:104 10.0 0.043 E -113.3 -178.3