Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133473453 . G A CCDS3080.1:NM_001063.3:c.440tGg>tAg_NP_001054.1:p.147W>* Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 TRP A:147 A:128 6.0 0.024 I -144.1 -60.3 6.0 0.024 0.0 BCT
FE
P6G
HOH
 4.823
8.099
9.532
2.948
 N
N
NE1
NE1
 O3
FE
C9
O
TRP B:147 B:128 3.0 0.012 I -149.1 -63.8 NA NA NA
TRP C:147 C:128 8.0 0.031 I -149.9 -67.0 NA NA NA
TRP D:147 D:128 3.0 0.012 I -145.5 -64.5 NA NA NA
TRP E:147 E:128 3.0 0.012 I -145.2 -61.9 NA NA NA
TRP F:147 F:128 8.0 0.031 I -146.9 -64.3 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 TRP B:147 B:128 6.0 0.024 I -136.0 -69.0 6.0 0.024 0.0 HOH
 7.202
 C
 O
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 TRP C:147 C:128 7.0 0.027 I -110.8 -50.0 7.0 0.027 0.0 FE
CO3
 8.570
4.906
 N
N
 FE
O3
TRP D:147 D:128 6.0 0.024 I -106.5 -41.5 6.0 0.024 0.0 FE
CO3
 8.726
5.004
 N
N
 FE
O1
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 TRP C:147 C:128 7.0 0.027 I -106.7 -54.6 7.0 0.027 0.0 FE
CO3
 9.066
4.899
 N
N
 FE
O1
TRP D:147 D:128 8.0 0.031 I -106.7 -54.6 8.0 0.031 0.0 FE
CO3
 9.068
4.905
 N
N
 FE
O1
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 TRP C:147 C:128 3.0 0.012 I -113.3 -54.1 3.0 0.012 0.0 FE
CO3
 8.780
5.251
 N
N
 FE
O1
TRP D:147 D:128 3.0 0.012 I -113.4 -54.1 3.0 0.012 0.0 FE
CO3
 8.766
5.179
 N
N
 FE
O1
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 TRP A:147 A:128 11.0 0.043 I -143.3 -66.8 11.0 0.043 0.0 CIT
 6.369
 H
 O1
TRP B:147 B:128 9.0 0.035 I -142.2 -68.0 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 TRP A:147 A:147 9.0 0.035 I -145.7 -64.3 9.0 0.035 0.0 HOH
 6.102
 N
 O
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 TRP A:128 A:128 12.0 0.047 I -153.3 -67.0 12.0 0.047 0.0 FE
CO3
SO4
HOH
 8.196
4.687
7.125
8.921
 N
N
N
CZ3
 FE
O1
O3
O
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 TRP A:128 A:128 7.0 0.027 I -145.8 -62.8 7.0 0.027 0.0 HOH
 5.655
 N
 O
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 TRP A:128 A:128 9.0 0.035 I -144.9 -68.6 9.0 0.035 0.0 HOH
 2.937
 NE1
 O
TRP B:128 B:128 7.0 0.027 I -144.6 -67.6 NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 TRP A:128 A:128 10.0 0.039 I -144.8 -64.8 10.0 0.039 0.0 4TI
CIT
HOH
 6.739
7.241
5.249
 N
N
N
 TI
O6
O
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 TRP A:128 A:128 6.0 0.024 I -144.1 -62.6 6.0 0.024 0.0 HOH
 3.210
 NE1
 O
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 TRP A:128 A:128 8.0 0.031 I -146.5 -62.0 8.0 0.031 0.0 FE
CIT
HOH
 7.116
6.751
2.951
 N
N
NE1
 FE
O6
O
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 TRP A:128 A:128 8.0 0.031 I -150.7 -70.0 8.0 0.031 0.0 BS3
CO3
NTA
HOH
 8.445
4.705
7.340
6.083
 N
N
N
N
 BI
O1
O4
O
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 TRP A:128 A:128 7.0 0.027 I -148.2 -65.7 7.0 0.027 0.0 NA
HOH
 7.214
5.335
 C
N
 NA
O
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 TRP A:128 A:128 8.0 0.031 I -132.6 -55.0 8.0 0.031 0.0 FE
8R6
HOH
 7.420
8.029
9.734
 N
N
N
 FE
C11
O
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 TRP A:128 A:128 4.0 0.016 I -155.6 -69.3 4.0 0.016 0.0 FE
POP
HOH
 8.481
6.954
5.267
 N
N
N
 FE
O6
O
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 TRP B:128 B:128 9.0 0.035 I -132.8 -67.0 9.0 0.035 0.0 GOL
GOL
HOH
 9.892
5.373
6.983
 N
N
C
 O1
C1
O
TRP D:128 D:128 9.0 0.035 I -132.0 -67.8 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 TRP C:126 C:128 7.0 0.027 I -144.9 -68.8 7.0 0.027 0.0
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 TRP C:126 C:128 9.0 0.035 I -138.9 -68.0 9.0 0.035 0.0
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 TRP A:125 A:128 7.0 0.027 I -141.9 -63.9 7.0 0.027 0.0 CIT
 8.441
 N
 O4
TRP B:125 B:128 9.0 0.035 I -141.1 -67.2 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 TRP C:142 C:128 14.0 0.055 I -130.4 -53.0 14.0 0.055 0.0 FE
CO3
 8.267
5.929
 N
N
 FE
O3
TRP D:142 D:128 22.0 0.086 I -125.5 -50.5 NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 TRP C:142 C:128 11.0 0.043 I -120.7 -52.3 11.0 0.043 0.0 CO3
FE
 5.644
8.752
 N
N
 O3
FE
TRP D:142 D:128 31.0 0.122 I -159.6 -55.9 NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 TRP C:142 C:128 10.0 0.039 I -147.7 -53.1 10.0 0.039 0.0 FE
CO3
 8.397
5.297
 N
N
 FE
O3
TRP D:142 D:128 87.0 0.341 I -137.2 -34.6 NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 TRP A:125 A:128 4.0 0.016 I -155.9 -53.3 4.0 0.016 0.0
TRP B:125 B:128 8.0 0.031 I -142.2 -72.6 NA NA NA
1bp5 1 P02787 100.0 0.0 X-RAY
 1999-01-13 TRP A:128 A:128 9.0 0.035 I -138.6 -65.1 9.0 0.035 0.0 HOH
 3.147
 NE1
 O
TRP B:128 B:128 9.0 0.035 I -139.4 -66.3 NA NA NA
TRP C:128 C:128 10.0 0.039 I -131.6 -72.1 NA NA NA
TRP D:128 D:128 10.0 0.039 I -138.5 -68.2 NA NA NA
1btj 1 P02787 100.0 0.0 X-RAY
 1999-01-13 TRP A:128 A:128 11.0 0.043 I -122.0 -68.5 11.0 0.043 0.0
TRP B:128 B:128 13.0 0.051 I -120.1 -63.8 NA NA NA
2o84 1 P02787 99.7 0.0 X-RAY
 2007-01-23 TRP A:128 X:128 8.0 0.031 I -135.6 -63.4 8.0 0.031 0.0 FE
CO3
HOH
 8.138
4.819
2.665
 N
N
NE1
 FE
O3
O
2o7u 1 P02787 99.41 0.0 X-RAY
 2007-01-23 TRP A:128 B:128 6.0 0.024 I -137.3 -65.6 6.0 0.024 0.0 FE
CO3
HOH
 8.055
4.829
9.078
 N
N
N
 FE
O1
O
TRP B:128 A:128 6.0 0.024 I -136.8 -64.0 NA NA NA
TRP C:128 C:128 5.0 0.02 I -134.7 -66.6 NA NA NA
TRP D:128 D:128 7.0 0.027 I -144.1 -73.3 NA NA NA
TRP E:128 E:128 7.0 0.027 I -144.3 -73.4 NA NA NA
TRP F:128 F:128 7.0 0.027 I -145.7 -74.4 NA NA NA
TRP G:128 G:128 7.0 0.027 I -141.2 -71.3 NA NA NA
TRP H:128 H:128 7.0 0.027 I -142.1 -71.1 NA NA NA
TRP I:128 I:128 7.0 0.027 I -142.8 -72.1 NA NA NA
3fgs 1 P02787 99.41 0.0 X-RAY
 2009-05-19 TRP A:128 A:128 5.0 0.02 I -138.5 -71.6 5.0 0.02 0.0 CO3
FE
HOH
 4.789
8.271
3.859
 N
N
CD1
 O3
FE
O
1oqg 1 P02787 99.7 0.0 X-RAY
 2003-03-18 TRP A:128 A:128 5.0 0.02 I -142.6 -63.2 5.0 0.02 0.0 CO3
FE
HOH
 5.023
8.095
2.729
 N
N
NE1
 O1
FE
O
1oqh 1 P02787 99.7 0.0 X-RAY
 2003-03-18 TRP A:128 A:128 8.0 0.031 I -143.4 -64.7 8.0 0.031 0.0 CO3
FE
HOH
 5.105
8.216
4.464
 N
N
CD1
 O1
FE
O
1jqf 1 P02787 99.7 0.0 X-RAY
 2001-10-17 TRP A:128 A:128 8.0 0.031 I -144.1 -67.3 8.0 0.031 0.0 CO3
FE
HOH
 4.864
8.123
2.796
 N
N
NE1
 O1
FE
O
1dtg 1 P02787 99.4 0.0 X-RAY
 2000-01-21 TRP A:128 A:128 7.0 0.027 I -147.9 -64.5 7.0 0.027 0.0 FE
CO3
HOH
 8.296
5.039
3.055
 N
N
NE1
 FE
O3
O
1n84 1 P02787 100.0 0.0 X-RAY
 2003-03-18 TRP A:128 A:128 7.0 0.027 I -142.7 -66.5 7.0 0.027 0.0 CO3
FE
HOH
 4.704
8.337
4.528
 N
N
CD1
 O3
FE
O
1fqe 1 P02787 99.7 0.0 X-RAY
 2001-05-16 TRP A:128 A:128 7.0 0.027 I -141.1 -65.7 7.0 0.027 0.0 FE
CO3
HOH
 8.106
4.900
2.928
 N
N
NE1
 FE
O1
O
1fqf 1 P02787 99.7 0.0 X-RAY
 2001-05-16 TRP A:128 A:128 7.0 0.027 I -138.3 -53.2 7.0 0.027 0.0 FE
CO3
HOH
 8.272
5.003
3.346
 N
N
NE1
 FE
O1
O
1n7x 1 P02787 99.7 0.0 X-RAY
 2003-03-18 TRP A:128 A:128 9.0 0.035 I -143.8 -71.5 9.0 0.035 0.0 CO3
FE
HOH
 4.692
8.384
2.789
 N
N
NE1
 O3
FE
O
1b3e 1 P02787 99.7 0.0 X-RAY
 1999-03-26 TRP A:125 A:128 7.0 0.027 I -143.8 -56.1 7.0 0.027 0.0 FE
CO3
HOH
 8.406
5.058
6.058
 N
N
O
 FE
O3
O
1a8e 1 P02787 100.0 0.0 X-RAY
 1998-06-17 TRP A:126 A:128 9.0 0.035 I -141.3 -63.1 9.0 0.035 0.0 CO3
FE
HOH
 5.010
8.275
4.474
 N
N
CD1
 O3
FE
O
1a8f 1 P02787 100.0 0.0 X-RAY
 1998-06-17 TRP A:126 A:128 10.0 0.039 I -145.0 -65.6 10.0 0.039 0.0 CO3
FE
HOH
 5.014
8.198
3.025
 N
N
NE1
 O3
FE
O
1suv 2 P02787 100.0 0.0 EM
 2004-04-13 TRP C:126 C:128 9.0 0.035 I -141.3 -63.1 9.0 0.035 0.0 CO3
FE
 5.011
8.275
 N
N
 O3
FE
TRP D:126 D:128 9.0 0.035 I -141.3 -63.1 9.0 0.035 0.0 CO3
FE
 5.010
8.275
 N
N
 O3
FE
1d3k 1 P02787 99.7 0.0 X-RAY
 2000-03-01 TRP A:126 A:128 8.0 0.031 I -143.5 -61.6 8.0 0.031 0.0 CO3
FE
HOH
 5.081
8.259
4.662
 N
N
CD1
 O3
FE
O
1d4n 1 P02787 99.7 0.0 X-RAY
 2000-03-01 TRP A:126 A:128 11.0 0.043 I -140.8 -67.0 11.0 0.043 0.0 CO3
FE
HOH
 4.924
8.334
4.577
 N
N
CD1
 O3
FE
O
1n7w 1 P02787 99.7 0.0 X-RAY
 2003-03-18 TRP A:128 A:128 7.0 0.027 I -138.3 -63.6 7.0 0.027 0.0 CO3
FE
HOH
 4.724
8.291
4.616
 N
N
CD1
 O3
FE
O
1ryo 1 P02787 100.0 0.0 X-RAY
 2004-05-11 TRP A:128 A:128 8.0 0.031 I -143.5 -65.2 8.0 0.031 0.0 OXL
FE
HOH
 4.889
8.454
2.891
 N
N
NE1
 O4
FE
O
1tfd 1 P19134 82.57 0.0 X-RAY
 1993-04-15 TRP A:128 A:128 16.0 0.063 I -151.6 -53.1 16.0 0.063 0.0 CO3
FE
 5.146
8.375
 N
N
 O2
FE

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 TRP A:147 A:147 6.0 0.024 I -142.2 -63.8