Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133474216 . A C CCDS3080.1:NM_001063.3:c.512aAt>aCt_NP_001054.1:p.171N>T Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 ASN A:171 A:152 102.0 0.637 H -74.4 -23.4 102.0 0.637 0.0 HOH
 2.938
 O
 O
ASN B:171 B:152 98.0 0.613 H -77.1 -22.3 NA NA NA
ASN C:171 C:152 98.0 0.613 H -77.9 -28.9 NA NA NA
ASN D:171 D:152 95.0 0.594 H -78.1 -28.0 NA NA NA
ASN E:171 E:152 97.0 0.606 H -78.8 -18.1 NA NA NA
ASN F:171 F:152 99.0 0.619 H -70.4 -27.1 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 ASN B:171 B:152 103.0 0.644 T -92.5 4.4 103.0 0.644 0.0 HOH
 9.254
 O
 O
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 ASN C:171 C:152 120.0 0.75 H -87.3 -8.8 120.0 0.75 0.0
ASN D:171 D:152 110.0 0.688 H -96.4 -11.7 110.0 0.688 0.0
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 ASN C:171 C:152 106.0 0.662 H -85.1 -30.1 106.0 0.662 0.0
ASN D:171 D:152 104.0 0.65 H -85.1 -30.2 104.0 0.65 0.0
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 ASN C:171 C:152 113.0 0.706 H -86.7 -15.1 113.0 0.706 0.0
ASN D:171 D:152 113.0 0.706 H -86.7 -15.1 113.0 0.706 0.0
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 ASN A:171 A:152 96.0 0.6 H -75.8 -36.6 96.0 0.6 0.0
ASN B:171 B:152 104.0 0.65 H -75.8 -36.9 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 ASN A:171 A:171 103.0 0.644 T -95.7 11.9 103.0 0.644 0.0 HOH
 5.373
 N
 O
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 ASN A:152 A:152 112.0 0.7 H -64.4 -19.6 112.0 0.7 0.0
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 ASN A:152 A:152 96.0 0.6 T -101.1 15.5 96.0 0.6 0.0 HOH
 2.982
 OD1
 O
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 ASN A:152 A:152 96.0 0.6 T -95.8 17.8 96.0 0.6 0.0 HOH
 3.983
 OD1
 O
ASN B:152 B:152 96.0 0.6 T -95.1 17.2 NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 ASN A:152 A:152 90.0 0.562 T -101.9 15.2 90.0 0.562 0.0 HOH
 5.124
 N
 O
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 ASN A:152 A:152 95.0 0.594 T -100.5 8.2 95.0 0.594 0.0 HOH
 3.749
 CA
 O
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 ASN A:152 A:152 100.0 0.625 T -103.8 11.0 100.0 0.625 0.0 HOH
 5.334
 O
 O
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 ASN A:152 A:152 112.0 0.7 H -90.5 -21.4 112.0 0.7 0.0 HOH
 5.323
 N
 O
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 ASN A:152 A:152 84.0 0.525 T -102.4 14.9 84.0 0.525 0.0
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 ASN A:152 A:152 94.0 0.588 T -98.7 16.4 94.0 0.588 0.0
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 ASN A:152 A:152 127.0 0.794 T -77.0 -1.9 127.0 0.794 0.0 HOH
 5.115
 O
 O
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 ASN B:152 B:152 102.0 0.637 H -87.9 -17.8 102.0 0.637 0.0
ASN D:152 D:152 99.0 0.619 H -88.6 -13.8 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 ASN C:150 C:152 99.0 0.619 H -92.1 -3.6 99.0 0.619 0.0
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 ASN C:150 C:152 92.0 0.575 H -89.4 -4.2 92.0 0.575 0.0
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 ASN A:149 A:152 101.0 0.631 H -76.0 -34.6 101.0 0.631 0.0
ASN B:149 B:152 98.0 0.613 H -56.6 -60.0 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ASN C:166 C:152 133.0 0.831 H -98.5 -28.4 133.0 0.831 0.0
ASN D:166 D:152 130.0 0.812 H -86.0 -23.8 NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ASN C:166 C:152 121.0 0.756 H -105.5 -31.2 121.0 0.756 0.0
ASN D:166 D:152 77.0 NA H -85.8 -29.5 NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ASN C:166 C:152 131.0 0.819 H -93.2 -25.2 131.0 0.819 0.0
ASN D:166 D:152 74.0 NA H -76.5 -34.2 NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 ASN A:149 A:152 103.0 0.644 H -60.1 -30.6 103.0 0.644 0.0
ASN B:149 B:152 92.0 0.575 H -74.0 -46.5 NA NA NA
1bp5 1 P02787 100.0 0.0 X-RAY
 1999-01-13 ASN A:152 A:152 79.0 0.494 H -82.8 -16.4 79.0 0.494 0.0 HOH
 3.010
 ND2
 O
ASN B:152 B:152 77.0 0.481 H -77.4 -33.1 NA NA NA
ASN C:152 C:152 88.0 0.55 T -87.1 -2.2 NA NA NA
ASN D:152 D:152 100.0 0.625 T -92.3 -9.4 NA NA NA
1btj 1 P02787 100.0 0.0 X-RAY
 1999-01-13 ASN A:152 A:152 78.0 0.487 T -94.2 29.5 78.0 0.487 0.0
ASN B:152 B:152 80.0 0.5 T -96.0 25.4 NA NA NA
2o84 1 P02787 99.7 0.0 X-RAY
 2007-01-23 ASN A:152 X:152 87.0 0.544 H -69.7 -34.5 87.0 0.544 0.0 K
HOH
 3.358
2.811
 O
ND2
 K
O
2o7u 1 P02787 99.41 0.0 X-RAY
 2007-01-23 ASN A:152 B:152 103.0 0.644 H -55.0 -27.9 103.0 0.644 0.0
ASN B:152 A:152 103.0 0.644 H -53.3 -28.4 NA NA NA
ASN C:152 C:152 103.0 0.644 H -56.3 -28.3 NA NA NA
ASN D:152 D:152 98.0 0.613 H -78.1 -21.8 NA NA NA
ASN E:152 E:152 97.0 0.606 H -79.5 -20.2 NA NA NA
ASN F:152 F:152 100.0 0.625 H -78.1 -20.6 NA NA NA
ASN G:152 G:152 97.0 0.606 H -77.0 -22.9 NA NA NA
ASN H:152 H:152 97.0 0.606 H -78.0 -22.7 NA NA NA
ASN I:152 I:152 95.0 0.594 H -77.4 -23.6 NA NA NA
3fgs 1 P02787 99.41 0.0 X-RAY
 2009-05-19 ASN A:152 A:152 96.0 0.6 H -72.4 -33.9 96.0 0.6 0.0 HOH
 2.691
 OD1
 O
1oqg 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ASN A:152 A:152 78.0 0.487 H -73.2 -31.4 78.0 0.487 0.0 HOH
 2.726
 O
 O
1oqh 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ASN A:152 A:152 87.0 0.544 H -77.5 -37.6 87.0 0.544 0.0 K
HOH
 2.998
2.744
 O
ND2
 K
O
1jqf 1 P02787 99.7 0.0 X-RAY
 2001-10-17 ASN A:152 A:152 82.0 0.512 H -76.8 -31.4 82.0 0.512 0.0 K
HOH
 3.060
2.938
 O
ND2
 K
O
1dtg 1 P02787 99.4 0.0 X-RAY
 2000-01-21 ASN A:152 A:152 67.0 0.419 H -80.5 -34.1 67.0 0.419 0.0 HOH
 8.759
 O
 O
1n84 1 P02787 100.0 0.0 X-RAY
 2003-03-18 ASN A:152 A:152 83.0 0.519 H -86.7 -23.8 83.0 0.519 0.0 HOH
 3.433
 O
 O
1fqe 1 P02787 99.7 0.0 X-RAY
 2001-05-16 ASN A:152 A:152 83.0 0.519 H -72.2 -34.4 83.0 0.519 0.0 K
HOH
 2.932
2.724
 O
OD1
 K
O
1fqf 1 P02787 99.7 0.0 X-RAY
 2001-05-16 ASN A:152 A:152 91.0 0.569 H -77.7 -20.2 91.0 0.569 0.0 HOH
 3.002
 O
 O
1n7x 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ASN A:152 A:152 87.0 0.544 H -87.7 -14.1 87.0 0.544 0.0 HOH
 2.757
 OD1
 O
1b3e 1 P02787 99.7 0.0 X-RAY
 1999-03-26 ASN A:149 A:152 89.0 0.556 H -99.9 -6.8 89.0 0.556 0.0 HOH
 5.146
 N
 O
1a8e 1 P02787 100.0 0.0 X-RAY
 1998-06-17 ASN A:150 A:152 71.0 0.444 H -88.6 -16.8 71.0 0.444 0.0 HOH
 5.109
 N
 O
1a8f 1 P02787 100.0 0.0 X-RAY
 1998-06-17 ASN A:150 A:152 92.0 0.575 H -84.8 -27.6 92.0 0.575 0.0 HOH
 4.494
 CB
 O
1suv 2 P02787 100.0 0.0 EM
 2004-04-13 ASN C:150 C:152 72.0 0.45 H -88.6 -16.8 72.0 0.45 0.0
ASN D:150 D:152 72.0 0.45 H -88.6 -16.7 72.0 0.45 0.0
1d3k 1 P02787 99.7 0.0 X-RAY
 2000-03-01 ASN A:150 A:152 74.0 0.463 H -89.1 -18.3 74.0 0.463 0.0 HOH
 3.638
 O
 O
1d4n 1 P02787 99.7 0.0 X-RAY
 2000-03-01 ASN A:150 A:152 70.0 0.438 H -84.7 -19.6 70.0 0.438 0.0 HOH
 4.873
 N
 O
1n7w 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ASN A:152 A:152 70.0 0.438 H -87.6 -22.0 70.0 0.438 0.0 HOH
 2.792
 O
 O
1ryo 1 P02787 100.0 0.0 X-RAY
 2004-05-11 ASN A:152 A:152 67.0 0.419 H -70.7 -37.6 67.0 0.419 0.0 HOH
 2.781
 O
 O
1tfd 1 P19134 82.57 0.0 X-RAY
 1993-04-15 SER A:152 A:152 66.0 0.574 T -69.4 -17.2 66.0 0.574 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 ASN A:171 A:171 97.0 0.606 H -79.7 -21.3