Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133474237 . C A CCDS3080.1:NM_001063.3:c.533gCc>gAc_NP_001054.1:p.178A>D Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 ALA A:178 A:159 0.0 0.0 -121.3 84.9 0.0 0.0 0.0 P6G
HOH
 7.941
5.263
 O
N
 O1
O
ALA B:178 B:159 0.0 0.0 -131.5 86.2 NA NA NA
ALA C:178 C:159 0.0 0.0 -129.4 84.9 NA NA NA
ALA D:178 D:159 0.0 0.0 -126.3 83.5 NA NA NA
ALA E:178 E:159 0.0 0.0 -128.3 84.7 NA NA NA
ALA F:178 F:159 0.0 0.0 -124.2 86.3 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 ALA B:178 B:159 0.0 0.0 -113.1 85.5 0.0 0.0 0.0
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 ALA C:178 C:159 0.0 0.0 -123.8 111.8 0.0 0.0 0.0
ALA D:178 D:159 0.0 0.0 -156.0 102.2 0.0 0.0 0.0
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 ALA C:178 C:159 0.0 0.0 -122.7 108.0 0.0 0.0 0.0
ALA D:178 D:159 0.0 0.0 -122.6 108.0 0.0 0.0 0.0
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 ALA C:178 C:159 0.0 0.0 -152.9 100.2 0.0 0.0 0.0
ALA D:178 D:159 0.0 0.0 -152.9 100.2 0.0 0.0 0.0
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 ALA A:178 A:159 0.0 0.0 -119.0 88.2 0.0 0.0 0.0
ALA B:178 B:159 0.0 0.0 -118.0 88.0 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 ALA A:178 A:178 0.0 0.0 -106.5 90.2 0.0 0.0 0.0 HOH
 5.198
 N
 O
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 ALA A:159 A:159 1.0 0.009 -117.4 101.9 1.0 0.009 0.0 HOH
 2.758
 O
 O
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 ALA A:159 A:159 0.0 0.0 -120.2 88.4 0.0 0.0 0.0 HOH
 5.234
 N
 O
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 ALA A:159 A:159 0.0 0.0 -120.8 84.3 0.0 0.0 0.0 HOH
 5.157
 N
 O
ALA B:159 B:159 0.0 0.0 -122.0 84.6 NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 ALA A:159 A:159 0.0 0.0 -125.5 89.6 0.0 0.0 0.0 HOH
 5.128
 N
 O
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 ALA A:159 A:159 0.0 0.0 -115.0 86.8 0.0 0.0 0.0 HOH
 5.167
 N
 O
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 ALA A:159 A:159 0.0 0.0 -112.9 87.6 0.0 0.0 0.0 HOH
 5.169
 N
 O
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 ALA A:159 A:159 0.0 0.0 -128.8 89.2 0.0 0.0 0.0 HOH
 5.420
 N
 O
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 ALA A:159 A:159 0.0 0.0 -119.2 80.1 0.0 0.0 0.0
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 ALA A:159 A:159 0.0 0.0 -115.0 83.6 0.0 0.0 0.0
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 ALA A:159 A:159 0.0 0.0 -120.7 82.0 0.0 0.0 0.0 HOH
 5.284
 N
 O
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 ALA B:159 B:159 0.0 0.0 -129.3 80.6 0.0 0.0 0.0 HOH
 5.175
 N
 O
ALA D:159 D:159 0.0 0.0 -130.2 82.5 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 ALA C:157 C:159 0.0 0.0 -117.6 89.9 0.0 0.0 0.0
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 ALA C:157 C:159 0.0 0.0 -118.7 88.1 0.0 0.0 0.0
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 ALA A:156 A:159 0.0 0.0 -107.7 89.4 0.0 0.0 0.0
ALA B:156 B:159 0.0 0.0 -104.4 87.0 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ALA C:173 C:159 1.0 0.009 -113.8 101.8 1.0 0.009 0.0
ALA D:173 D:159 5.0 0.043 -115.0 101.2 NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ALA C:173 C:159 1.0 0.009 -115.9 102.2 1.0 0.009 0.0
ALA D:173 D:159 29.0 0.252 360.0 104.2 NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ALA C:173 C:159 0.0 0.0 -115.9 107.1 0.0 0.0 0.0
ALA D:173 D:159 21.0 0.183 -130.0 114.7 NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 ALA A:156 A:159 0.0 0.0 -120.7 88.2 0.0 0.0 0.0
ALA B:156 B:159 0.0 0.0 -105.6 93.7 NA NA NA
1bp5 1 P02787 100.0 0.0 X-RAY
 1999-01-13 ALA A:159 A:159 0.0 0.0 -122.4 85.5 0.0 0.0 0.0 HOH
 5.415
 N
 O
ALA B:159 B:159 0.0 0.0 -111.9 83.6 NA NA NA
ALA C:159 C:159 0.0 0.0 -119.5 90.2 NA NA NA
ALA D:159 D:159 0.0 0.0 -119.9 82.8 NA NA NA
1btj 1 P02787 100.0 0.0 X-RAY
 1999-01-13 ALA A:159 A:159 0.0 0.0 -126.8 88.6 0.0 0.0 0.0
ALA B:159 B:159 0.0 0.0 -116.4 86.1 NA NA NA
2o84 1 P02787 99.7 0.0 X-RAY
 2007-01-23 ALA A:159 X:159 0.0 0.0 -111.7 90.2 0.0 0.0 0.0 HOH
 5.916
 O
 O
2o7u 1 P02787 99.41 0.0 X-RAY
 2007-01-23 ALA A:159 B:159 0.0 0.0 -124.8 91.0 0.0 0.0 0.0
ALA B:159 A:159 0.0 0.0 -121.4 92.6 NA NA NA
ALA C:159 C:159 0.0 0.0 -125.0 92.1 NA NA NA
ALA D:159 D:159 0.0 0.0 -117.5 81.6 NA NA NA
ALA E:159 E:159 0.0 0.0 -118.4 80.8 NA NA NA
ALA F:159 F:159 0.0 0.0 -118.0 80.9 NA NA NA
ALA G:159 G:159 0.0 0.0 -115.8 80.2 NA NA NA
ALA H:159 H:159 0.0 0.0 -115.5 80.5 NA NA NA
ALA I:159 I:159 0.0 0.0 -115.5 79.9 NA NA NA
3fgs 1 P02787 99.41 0.0 X-RAY
 2009-05-19 ALA A:159 A:159 0.0 0.0 -122.7 85.9 0.0 0.0 0.0 HOH
 5.226
 N
 O
1oqg 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ALA A:159 A:159 0.0 0.0 -123.2 83.6 0.0 0.0 0.0 HOH
 5.385
 N
 O
1oqh 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ALA A:159 A:159 0.0 0.0 -121.8 85.9 0.0 0.0 0.0 HOH
 5.580
 N
 O
1jqf 1 P02787 99.7 0.0 X-RAY
 2001-10-17 ALA A:159 A:159 0.0 0.0 -121.3 84.5 0.0 0.0 0.0 HOH
 5.361
 N
 O
1dtg 1 P02787 99.4 0.0 X-RAY
 2000-01-21 ALA A:159 A:159 0.0 0.0 -127.8 82.9 0.0 0.0 0.0 HOH
 5.393
 N
 O
1n84 1 P02787 100.0 0.0 X-RAY
 2003-03-18 ALA A:159 A:159 0.0 0.0 -120.3 80.7 0.0 0.0 0.0 HOH
 5.422
 N
 O
1fqe 1 P02787 99.7 0.0 X-RAY
 2001-05-16 ALA A:159 A:159 0.0 0.0 -120.7 86.2 0.0 0.0 0.0 HOH
 5.377
 N
 O
1fqf 1 P02787 99.7 0.0 X-RAY
 2001-05-16 ALA A:159 A:159 0.0 0.0 -124.7 81.5 0.0 0.0 0.0 HOH
 5.225
 N
 O
1n7x 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ALA A:159 A:159 0.0 0.0 -124.0 89.5 0.0 0.0 0.0 HOH
 5.261
 N
 O
1b3e 1 P02787 99.7 0.0 X-RAY
 1999-03-26 ALA A:156 A:159 0.0 0.0 -116.4 81.9 0.0 0.0 0.0 HOH
 5.406
 N
 O
1a8e 1 P02787 100.0 0.0 X-RAY
 1998-06-17 ALA A:157 A:159 0.0 0.0 -127.0 89.9 0.0 0.0 0.0 HOH
 5.334
 N
 O
1a8f 1 P02787 100.0 0.0 X-RAY
 1998-06-17 ALA A:157 A:159 0.0 0.0 -124.3 84.6 0.0 0.0 0.0 HOH
 5.436
 N
 O
1suv 2 P02787 100.0 0.0 EM
 2004-04-13 ALA C:157 C:159 0.0 0.0 -127.0 89.9 0.0 0.0 0.0
ALA D:157 D:159 0.0 0.0 -127.0 89.9 0.0 0.0 0.0
1d3k 1 P02787 99.7 0.0 X-RAY
 2000-03-01 ALA A:157 A:159 0.0 0.0 -124.7 86.7 0.0 0.0 0.0 HOH
 5.397
 N
 O
1d4n 1 P02787 99.7 0.0 X-RAY
 2000-03-01 ALA A:157 A:159 0.0 0.0 -125.5 86.6 0.0 0.0 0.0 HOH
 5.236
 N
 O
1n7w 1 P02787 99.7 0.0 X-RAY
 2003-03-18 ALA A:159 A:159 0.0 0.0 -121.8 86.5 0.0 0.0 0.0 HOH
 5.391
 N
 O
1ryo 1 P02787 100.0 0.0 X-RAY
 2004-05-11 ALA A:159 A:159 0.0 0.0 -125.6 83.2 0.0 0.0 0.0 HOH
 5.344
 N
 O
1tfd 1 P19134 82.57 0.0 X-RAY
 1993-04-15 VAL A:159 A:159 0.0 0.0 -111.9 90.3 0.0 0.0 0.0 CO3
 9.779
 CG1
 O2

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 ALA A:178 A:178 0.0 0.0 -116.8 84.8