Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133475813 . G A CCDS3080.1:NM_001063.3:c.830gGc>gAc_NP_001054.1:p.277G>D Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 GLY A:277 A:258 0.0 0.0 S -130.1 15.6 0.0 0.0 0.0 SO4
HOH
 6.181
2.788
 N
O
 O4
O
GLY B:277 B:258 5.0 0.067 -124.9 8.7 NA NA NA
GLY C:277 C:258 0.0 0.0 -130.5 4.7 NA NA NA
GLY D:277 D:258 5.0 0.067 -118.8 -0.8 NA NA NA
GLY E:277 E:258 0.0 0.0 -133.4 10.9 NA NA NA
GLY F:277 F:258 0.0 0.0 S -138.3 14.5 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 GLY B:277 B:258 37.0 0.493 S 162.5 141.1 37.0 0.493 0.0 HOH
 5.344
 O
 O
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 GLY C:277 C:258 0.0 0.0 78.6 -136.6 0.0 0.0 0.0
GLY D:277 D:258 1.0 0.013 74.4 -142.0 1.0 0.013 0.0
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 GLY C:277 C:258 0.0 0.0 74.2 -136.5 0.0 0.0 0.0
GLY D:277 D:258 1.0 0.013 74.1 -136.4 1.0 0.013 0.0
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 GLY C:277 C:258 13.0 0.173 72.9 -164.5 13.0 0.173 0.0
GLY D:277 D:258 14.0 0.187 72.9 -164.5 14.0 0.187 0.0
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 GLY A:277 A:258 0.0 0.0 -91.5 -4.9 0.0 0.0 0.0
GLY B:277 B:258 0.0 0.0 -90.9 -4.3 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 GLY A:277 A:277 0.0 0.0 -97.3 -1.5 0.0 0.0 0.0 HOH
 2.675
 O
 O
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 GLY A:258 A:258 0.0 0.0 132.6 -131.7 0.0 0.0 0.0
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 GLY A:258 A:258 3.0 0.04 90.1 -146.3 3.0 0.04 0.0 HOH
 6.401
 N
 O
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 GLY A:258 A:258 1.0 0.013 44.6 -122.0 1.0 0.013 0.0 HOH
 9.345
 CA
 O
GLY B:258 B:258 2.0 0.027 45.2 -122.1 NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 GLY A:258 A:258 4.0 0.053 47.7 -138.1 4.0 0.053 0.0
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 GLY A:258 A:258 4.0 0.053 72.6 -143.0 4.0 0.053 0.0 HOH
 3.566
 CA
 O
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 GLY A:258 A:258 6.0 0.08 B 84.7 -150.5 6.0 0.08 0.0 HOH
 2.244
 O
 O
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 GLY A:258 A:258 0.0 0.0 -83.5 -0.4 0.0 0.0 0.0 HOH
 2.706
 O
 O
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 GLY A:258 A:258 3.0 0.04 73.0 -145.1 3.0 0.04 0.0
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 GLY A:258 A:258 5.0 0.067 72.1 -141.8 5.0 0.067 0.0
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 GLY A:258 A:258 1.0 0.013 -84.3 -17.6 1.0 0.013 0.0 HOH
 2.418
 O
 O
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 GLY B:258 B:258 0.0 0.0 -76.4 -11.0 0.0 0.0 0.0 HOH
 2.597
 O
 O
GLY D:258 D:258 0.0 0.0 -77.5 -13.7 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 GLY C:256 C:258 7.0 0.093 -90.5 131.1 7.0 0.093 0.0
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 GLY C:256 C:258 10.0 0.133 -92.5 134.5 10.0 0.133 0.0
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 GLY A:255 A:258 1.0 0.013 96.8 -20.0 1.0 0.013 0.0
GLY B:255 B:258 1.0 0.013 T 77.1 -17.1 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 GLY C:272 C:258 0.0 0.0 S -105.1 -7.4 0.0 0.0 0.0
GLY D:272 D:258 1.0 0.013 S -117.0 8.5 NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 GLY C:272 C:258 0.0 0.0 S -117.4 1.4 0.0 0.0 0.0
GLY D:272 D:258 1.0 0.013 S -123.5 10.3 NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 GLY C:272 C:258 0.0 0.0 -103.5 23.7 0.0 0.0 0.0
GLY D:272 D:258 6.0 0.08 S -134.1 15.6 NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 GLY A:255 A:258 0.0 0.0 -92.6 -4.5 0.0 0.0 0.0
GLY B:255 B:258 0.0 0.0 -76.8 -4.1 NA NA NA
1bp5 1 P02787 100.0 0.0 X-RAY
 1999-01-13 GLY A:258 A:258 0.0 0.0 -79.2 -13.9 0.0 0.0 0.0 HOH
 2.663
 N
 O
GLY B:258 B:258 0.0 0.0 -93.3 3.0 NA NA NA
GLY C:258 C:258 1.0 0.013 -89.4 -8.3 NA NA NA
GLY D:258 D:258 0.0 0.0 -60.4 -28.0 NA NA NA
1btj 1 P02787 100.0 0.0 X-RAY
 1999-01-13 GLY A:258 A:258 0.0 0.0 29.3 -73.6 0.0 0.0 0.0
GLY B:258 B:258 0.0 0.0 37.3 -68.9 NA NA NA
2o84 1 P02787 99.7 0.0 X-RAY
 2007-01-23 GLY A:258 X:258 1.0 0.013 -76.3 -18.3 1.0 0.013 0.0 HOH
 3.329
 N
 O
2o7u 1 P02787 99.41 0.0 X-RAY
 2007-01-23 GLY A:258 B:258 0.0 0.0 -85.7 3.4 0.0 0.0 0.0
GLY B:258 A:258 0.0 0.0 -89.7 6.9 NA NA NA
GLY C:258 C:258 0.0 0.0 -92.3 8.0 NA NA NA
GLY D:258 D:258 0.0 0.0 -92.3 5.5 NA NA NA
GLY E:258 E:258 0.0 0.0 -93.1 6.0 NA NA NA
GLY F:258 F:258 0.0 0.0 -93.8 7.7 NA NA NA
GLY G:258 G:258 0.0 0.0 -94.9 8.3 NA NA NA
GLY H:258 H:258 0.0 0.0 -95.7 8.3 NA NA NA
GLY I:258 I:258 0.0 0.0 -95.3 8.3 NA NA NA
3fgs 1 P02787 99.41 0.0 X-RAY
 2009-05-19 GLY A:258 A:258 0.0 0.0 -91.3 -2.6 0.0 0.0 0.0 HOH
 2.752
 N
 O
1oqg 1 P02787 99.7 0.0 X-RAY
 2003-03-18 GLY A:258 A:258 1.0 0.013 -84.5 -11.2 1.0 0.013 0.0 HOH
 2.733
 O
 O
1oqh 1 P02787 99.7 0.0 X-RAY
 2003-03-18 GLY A:258 A:258 1.0 0.013 -88.1 -8.2 1.0 0.013 0.0 HOH
 3.088
 N
 O
1jqf 1 P02787 99.7 0.0 X-RAY
 2001-10-17 GLY A:258 A:258 1.0 0.013 -81.1 -11.0 1.0 0.013 0.0 HOH
 2.834
 O
 O
1dtg 1 P02787 99.4 0.0 X-RAY
 2000-01-21 GLY A:258 A:258 1.0 0.013 -75.7 -13.6 1.0 0.013 0.0 HOH
 2.751
 N
 O
1n84 1 P02787 100.0 0.0 X-RAY
 2003-03-18 GLY A:258 A:258 0.0 0.0 -85.9 -1.6 0.0 0.0 0.0 HOH
 3.094
 O
 O
1fqe 1 P02787 99.7 0.0 X-RAY
 2001-05-16 GLY A:258 A:258 0.0 0.0 -80.5 -8.4 0.0 0.0 0.0 HOH
 2.969
 O
 O
1fqf 1 P02787 99.7 0.0 X-RAY
 2001-05-16 GLY A:258 A:258 0.0 0.0 -91.7 -2.7 0.0 0.0 0.0 HOH
 2.909
 O
 O
1n7x 1 P02787 99.7 0.0 X-RAY
 2003-03-18 GLY A:258 A:258 0.0 0.0 -91.8 -2.6 0.0 0.0 0.0 HOH
 2.871
 O
 O
1b3e 1 P02787 99.7 0.0 X-RAY
 1999-03-26 GLY A:255 A:258 1.0 0.013 -83.3 -2.9 1.0 0.013 0.0 HOH
 2.978
 O
 O
1a8e 1 P02787 100.0 0.0 X-RAY
 1998-06-17 GLY A:256 A:258 1.0 0.013 -82.1 -8.1 1.0 0.013 0.0 HOH
 2.624
 N
 O
1a8f 1 P02787 100.0 0.0 X-RAY
 1998-06-17 GLY A:256 A:258 1.0 0.013 -77.6 -15.8 1.0 0.013 0.0 HOH
 2.794
 O
 O
1suv 2 P02787 100.0 0.0 EM
 2004-04-13 GLY C:256 C:258 0.0 0.0 -82.2 -8.1 0.0 0.0 0.0
GLY D:256 D:258 1.0 0.013 -82.1 -8.2 1.0 0.013 0.0
1d3k 1 P02787 99.7 0.0 X-RAY
 2000-03-01 GLY A:256 A:258 0.0 0.0 -82.4 -6.3 0.0 0.0 0.0 HOH
 2.807
 N
 O
1d4n 1 P02787 99.7 0.0 X-RAY
 2000-03-01 GLY A:256 A:258 0.0 0.0 -84.2 -5.9 0.0 0.0 0.0 HOH
 2.764
 O
 O
1n7w 1 P02787 99.7 0.0 X-RAY
 2003-03-18 GLY A:258 A:258 0.0 0.0 -91.3 7.4 0.0 0.0 0.0 HOH
 2.926
 O
 O
1ryo 1 P02787 100.0 0.0 X-RAY
 2004-05-11 GLY A:258 A:258 1.0 0.013 -84.0 -11.0 1.0 0.013 0.0 HOH
 2.792
 O
 O
1tfd 1 P19134 82.57 0.0 X-RAY
 1993-04-15 GLY A:258 A:258 20.0 0.267 -62.7 171.9 20.0 0.267 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 GLY A:277 A:277 0.0 0.0 -80.5 -7.4