Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133476698 . A C CCDS3080.1:NM_001063.3:c.956cAc>cCc_NP_001054.1:p.319H>P Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 HIS A:319 A:300 52.0 0.267 -113.3 -5.7 52.0 0.267 0.0 SO4
HOH
 9.343
3.350
 NE2
CD2
 O4
O
HIS B:319 B:300 47.0 0.241 E -107.3 -8.8 NA NA NA
HIS C:319 C:300 57.0 0.292 E -105.8 -7.8 NA NA NA
HIS D:319 D:300 50.0 0.256 -110.2 -3.3 NA NA NA
HIS E:319 E:300 59.0 0.303 -107.5 -2.0 NA NA NA
HIS F:319 F:300 49.0 0.251 -108.6 -1.4 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 HIS B:319 B:300 104.0 0.533 -124.1 3.3 104.0 0.533 0.0 HOH
 9.620
 N
 O
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 HIS C:319 C:300 60.0 0.308 -123.2 -22.1 60.0 0.308 0.0
HIS D:319 D:300 72.0 0.369 -81.1 -18.0 72.0 0.369 0.0
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 HIS C:319 C:300 55.0 0.282 -132.6 -2.5 55.0 0.282 0.0
HIS D:319 D:300 53.0 0.272 -132.5 -2.6 53.0 0.272 0.0
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 HIS C:319 C:300 56.0 0.287 -129.5 -5.9 56.0 0.287 0.0
HIS D:319 D:300 58.0 0.297 -129.5 -6.0 58.0 0.297 0.0
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 HIS A:319 A:300 77.0 0.395 -99.6 -23.4 77.0 0.395 0.0
HIS B:319 B:300 75.0 0.385 -98.7 -22.5 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 HIS A:319 A:319 52.0 0.267 -109.2 -12.7 52.0 0.267 0.0 HOH
 8.929
 N
 O
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 HIS A:300 A:300 63.0 0.323 -101.6 -9.2 63.0 0.323 0.0
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 HIS A:300 A:300 57.0 0.292 -104.4 -7.3 57.0 0.292 0.0 HOH
 2.702
 O
 O
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 HIS A:300 A:300 68.0 0.349 -111.7 -4.2 68.0 0.349 0.0 HOH
 2.802
 O
 O
HIS B:300 B:300 43.0 0.221 -111.4 -4.3 NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 HIS A:300 A:300 52.0 0.267 -103.8 -1.7 52.0 0.267 0.0 HOH
 9.817
 N
 O
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 HIS A:300 A:300 40.0 0.205 -106.8 -4.8 40.0 0.205 0.0 HOH
 2.796
 O
 O
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 HIS A:300 A:300 47.0 0.241 -104.8 -17.3 47.0 0.241 0.0 HOH
 2.697
 O
 O
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 HIS A:300 A:300 72.0 0.369 -103.4 -14.7 72.0 0.369 0.0 HOH
 2.612
 O
 O
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 HIS A:300 A:300 63.0 0.323 -109.3 1.1 63.0 0.323 0.0 HOH
 9.360
 N
 O
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 HIS A:300 A:300 65.0 0.333 -111.7 -14.3 65.0 0.333 0.0
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 HIS A:300 A:300 90.0 0.462 -102.3 -12.8 90.0 0.462 0.0 HOH
 2.618
 O
 O
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 HIS B:300 B:300 49.0 0.251 E -95.0 -11.2 49.0 0.251 0.0 HOH
 9.094
 N
 O
HIS D:300 D:300 49.0 0.251 E -95.7 -11.6 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 HIS C:298 C:300 71.0 0.364 -104.4 -8.3 71.0 0.364 0.0
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 HIS C:298 C:300 68.0 0.349 -105.2 -5.4 68.0 0.349 0.0
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 HIS A:297 A:300 82.0 0.421 -124.4 -24.9 82.0 0.421 0.0
HIS B:297 B:300 44.0 0.226 -132.5 -14.3 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 HIS C:314 C:300 78.0 0.4 -130.0 25.6 78.0 0.4 0.0
HIS D:314 D:300 84.0 0.431 E -119.6 -37.6 NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 HIS C:314 C:300 83.0 0.426 -125.3 30.0 83.0 0.426 0.0
HIS D:314 D:300 31.0 NA E -121.2 -32.5 NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 HIS C:314 C:300 77.0 0.395 E -114.8 -8.8 77.0 0.395 0.0
HIS D:314 D:300 51.0 NA -91.5 -58.4 NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 HIS A:297 A:300 71.0 0.364 -99.4 -21.8 71.0 0.364 0.0
HIS B:297 B:300 67.0 0.344 -89.4 -22.3 NA NA NA
1bp5 1 P02787 100.0 0.0 X-RAY
 1999-01-13 HIS A:300 A:300 52.0 0.267 -102.9 -22.1 52.0 0.267 0.0 HOH
 2.764
 O
 O
HIS B:300 B:300 56.0 0.287 -95.1 -12.6 NA NA NA
HIS C:300 C:300 40.0 0.205 -101.7 -19.3 NA NA NA
HIS D:300 D:300 49.0 0.251 -106.7 -23.3 NA NA NA
1btj 1 P02787 100.0 0.0 X-RAY
 1999-01-13 HIS A:300 A:300 43.0 0.221 -100.3 -19.3 43.0 0.221 0.0
HIS B:300 B:300 44.0 0.226 -100.1 -22.1 NA NA NA
2o84 1 P02787 99.7 0.0 X-RAY
 2007-01-23 HIS A:300 X:300 43.0 0.221 E -118.7 -10.2 43.0 0.221 0.0 HOH
 5.222
 CE1
 O
2o7u 1 P02787 99.41 0.0 X-RAY
 2007-01-23 HIS A:300 B:300 48.0 0.246 -124.6 -19.4 48.0 0.246 0.0 HOH
 8.139
 N
 O
HIS B:300 A:300 49.0 0.251 -126.1 -17.6 NA NA NA
HIS C:300 C:300 48.0 0.246 -123.2 -22.1 NA NA NA
HIS D:300 D:300 46.0 0.236 -113.8 -5.8 NA NA NA
HIS E:300 E:300 47.0 0.241 -109.2 -9.5 NA NA NA
HIS F:300 F:300 48.0 0.246 -110.2 -8.2 NA NA NA
HIS G:300 G:300 45.0 0.231 -109.4 -8.7 NA NA NA
HIS H:300 H:300 47.0 0.241 -108.4 -9.7 NA NA NA
HIS I:300 I:300 46.0 0.236 -110.1 -8.1 NA NA NA
3fgs 1 P02787 99.41 0.0 X-RAY
 2009-05-19 HIS A:300 A:300 51.0 0.262 -113.5 -10.6 51.0 0.262 0.0 HOH
 2.655
 O
 O
1oqg 1 P02787 99.7 0.0 X-RAY
 2003-03-18 HIS A:300 A:300 50.0 0.256 -116.7 -4.9 50.0 0.256 0.0 HOH
 2.698
 O
 O
1oqh 1 P02787 99.7 0.0 X-RAY
 2003-03-18 HIS A:300 A:300 47.0 0.241 -117.5 -7.8 47.0 0.241 0.0 HOH
 2.652
 O
 O
1jqf 1 P02787 99.7 0.0 X-RAY
 2001-10-17 HIS A:300 A:300 51.0 0.262 -117.1 -8.6 51.0 0.262 0.0 HOH
 2.666
 O
 O
1dtg 1 P02787 99.4 0.0 X-RAY
 2000-01-21 HIS A:300 A:300 41.0 0.21 -114.4 -4.4 41.0 0.21 0.0 HOH
 2.791
 NE2
 O
1n84 1 P02787 100.0 0.0 X-RAY
 2003-03-18 HIS A:300 A:300 50.0 0.256 E -110.5 -10.8 50.0 0.256 0.0 HOH
 3.516
 ND1
 O
1fqe 1 P02787 99.7 0.0 X-RAY
 2001-05-16 HIS A:300 A:300 45.0 0.231 -111.0 -10.8 45.0 0.231 0.0 HOH
 2.622
 ND1
 O
1fqf 1 P02787 99.7 0.0 X-RAY
 2001-05-16 HIS A:300 A:300 53.0 0.272 -114.2 -3.0 53.0 0.272 0.0 HOH
 2.520
 O
 O
1n7x 1 P02787 99.7 0.0 X-RAY
 2003-03-18 HIS A:300 A:300 54.0 0.277 E -112.8 -6.3 54.0 0.277 0.0 HOH
 3.784
 CE1
 O
1b3e 1 P02787 99.7 0.0 X-RAY
 1999-03-26 HIS A:297 A:300 44.0 0.226 E -116.0 -13.6 44.0 0.226 0.0 HOH
 4.072
 CD2
 O
1a8e 1 P02787 100.0 0.0 X-RAY
 1998-06-17 HIS A:298 A:300 49.0 0.251 -117.6 -10.2 49.0 0.251 0.0 HOH
 2.653
 O
 O
1a8f 1 P02787 100.0 0.0 X-RAY
 1998-06-17 HIS A:298 A:300 46.0 0.236 E -115.8 -6.0 46.0 0.236 0.0 HOH
 2.593
 O
 O
1suv 2 P02787 100.0 0.0 EM
 2004-04-13 HIS C:298 C:300 49.0 0.251 -117.5 -10.3 49.0 0.251 0.0
HIS D:298 D:300 48.0 0.246 -117.6 -10.2 48.0 0.246 0.0
1d3k 1 P02787 99.7 0.0 X-RAY
 2000-03-01 HIS A:298 A:300 50.0 0.256 -114.2 -10.4 50.0 0.256 0.0 HOH
 2.476
 O
 O
1d4n 1 P02787 99.7 0.0 X-RAY
 2000-03-01 HIS A:298 A:300 50.0 0.256 -112.9 -13.6 50.0 0.256 0.0 HOH
 2.645
 O
 O
1n7w 1 P02787 99.7 0.0 X-RAY
 2003-03-18 HIS A:300 A:300 50.0 0.256 E -114.8 -20.0 50.0 0.256 0.0 HOH
 3.799
 ND1
 O
1ryo 1 P02787 100.0 0.0 X-RAY
 2004-05-11 HIS A:300 A:300 52.0 0.267 E -113.9 -6.8 52.0 0.267 0.0 HOH
 2.742
 CD2
 O
1tfd 1 P19134 82.57 0.0 X-RAY
 1993-04-15 TYR A:300 A:300 68.0 0.296 -122.6 -25.3 68.0 0.296 0.0

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 HIS A:319 A:319 65.0 0.333 -107.2 -8.4