Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133478076 . A C CCDS3080.1:NM_001063.3:c.1106cAc>cCc_NP_001054.1:p.369H>P Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 HIS A:369 A:350 50.0 0.256 H -61.4 -49.6 50.0 0.256 0.0 HOH
 3.872
 CB
 O
HIS B:369 B:350 56.0 0.287 H -59.2 -50.2 NA NA NA
HIS C:369 C:350 49.0 0.251 H -58.3 -40.2 NA NA NA
HIS D:369 D:350 53.0 0.272 H -52.7 -52.1 NA NA NA
HIS E:369 E:350 48.0 0.246 H -63.7 -47.3 NA NA NA
HIS F:369 F:350 44.0 0.226 H -58.4 -51.1 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 HIS B:369 B:350 88.0 0.451 H -67.4 -39.4 88.0 0.451 0.0 HOH
 8.851
 CE1
 O
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 HIS C:369 C:350 50.0 0.256 T -97.4 -42.5 50.0 0.256 0.0 NAG
 7.620
 NE2
 C8
HIS D:369 D:350 72.0 0.369 T -107.2 -36.3 72.0 0.369 0.0 NAG
 8.284
 NE2
 C8
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 HIS C:369 C:350 59.0 0.303 T -98.0 -16.7 59.0 0.303 0.0 NAG
 7.720
 NE2
 C8
HIS D:369 D:350 60.0 0.308 T -98.0 -16.6 60.0 0.308 0.0 NAG
 7.744
 NE2
 C8
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 HIS C:369 C:350 65.0 0.333 T -109.6 -44.7 65.0 0.333 0.0 NAG
 7.791
 CE1
 C8
HIS D:369 D:350 65.0 0.333 T -109.6 -44.8 65.0 0.333 0.0 NAG
 7.880
 CE1
 C8
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 HIS A:369 A:350 81.0 0.415 H -67.1 -39.9 81.0 0.415 0.0
HIS B:369 B:350 84.0 0.431 H -65.8 -39.9 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 HIS A:369 A:369 99.0 0.508 H -67.6 -50.5 99.0 0.508 0.0
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 HIS A:350 A:350 53.0 0.272 H -46.4 -49.5 53.0 0.272 0.0 HOH
 2.326
 ND1
 O
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 HIS A:350 A:350 85.0 0.436 H -78.1 -35.2 85.0 0.436 0.0 HOH
 9.382
 C
 O
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 HIS A:350 A:350 87.0 0.446 H -70.9 -37.9 87.0 0.446 0.0
HIS B:350 B:350 91.0 0.467 H -71.0 -38.1 NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 HIS A:350 A:350 99.0 0.508 H -77.6 -42.1 99.0 0.508 0.0 HOH
 3.989
 ND1
 O
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 HIS A:350 A:350 71.0 0.364 H -73.3 -36.0 71.0 0.364 0.0 HOH
 9.070
 C
 O
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 HIS A:350 A:350 81.0 0.415 H -73.5 -29.6 81.0 0.415 0.0
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 HIS A:350 A:350 62.0 0.318 H -60.2 -49.4 62.0 0.318 0.0 HOH
 2.639
 ND1
 O
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 HIS A:350 A:350 19.0 NA H -83.4 -31.9 19.0 NA NA
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 HIS A:350 A:350 27.0 NA H -61.9 -41.8 27.0 NA NA
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 HIS A:350 A:350 60.0 0.308 H -57.7 -48.0 60.0 0.308 0.0 HOH
 2.454
 ND1
 O
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 HIS B:350 B:350 61.0 0.313 H -55.3 -53.3 6.0 0.031 0.282 A:Q09057:0.282
 HOH
 5.819
 N
 O
HIS D:350 D:350 59.0 0.303 H -63.1 -55.7 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 HIS C:348 C:350 70.0 0.359 H -72.7 -46.0 60.0 0.308 0.051 A:Q8WPU1:0.051
 HOH
 4.565
 NE2
 O
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 HIS C:348 C:350 70.0 0.359 H -68.6 -49.1 58.0 0.297 0.062 A:Q8WPU1:0.062
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 HIS A:347 A:350 82.0 0.421 H -65.7 -28.4 82.0 0.421 0.0
HIS B:347 B:350 90.0 0.462 H -67.9 -31.1 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 HIS C:364 C:350 85.0 0.436 H -69.8 -34.4 85.0 0.436 0.0 NAG
 8.158
 CE1
 C8
HIS D:364 D:350 78.0 0.4 T -82.1 -22.7 NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 HIS C:364 C:350 87.0 0.446 T -68.0 -25.4 87.0 0.446 0.0 NAG
 8.241
 CE1
 C8
HIS D:364 D:350 83.0 0.426 H -79.5 -20.7 NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 HIS C:364 C:350 89.0 0.456 H -71.0 -33.6 89.0 0.456 0.0 NAG
 7.815
 CE1
 C8
HIS D:364 D:350 82.0 0.421 H -74.4 -25.4 NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 HIS A:347 A:350 84.0 0.431 H -60.7 -25.7 84.0 0.431 0.0
HIS B:347 B:350 82.0 0.421 H -60.9 -32.4 NA NA NA
3v89 2 P02787 100.0 0.0 X-RAY
 2012-02-15 HIS B:14 B:350 80.0 0.41 H -69.4 -42.6 80.0 0.41 0.0
3skp 1 P02787 100.0 0.0 X-RAY
 2012-02-15 HIS A:13 A:350 77.0 0.395 H -65.4 -37.2 77.0 0.395 0.0 SO4
SO4
HOH
 2.683
5.974
2.824
 CD2
N
O
 O4
O4
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 HIS A:369 A:369 48.0 0.246 H -61.4 -48.3