Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133478130 . G A CCDS3080.1:NM_001063.3:c.1160tGt>tAt_NP_001054.1:p.387C>Y Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 

PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 CYS A:387 A:368 18.0 0.133 E -118.6 140.0 18.0 0.133 0.0 HOH
 4.129
 O
 O
CYS B:387 B:368 20.0 0.148 E -117.7 136.3 NA NA NA
CYS C:387 C:368 22.0 0.163 E -124.3 137.1 NA NA NA
CYS D:387 D:368 18.0 0.133 E -125.8 137.8 NA NA NA
CYS E:387 E:368 19.0 0.141 E -130.8 138.6 NA NA NA
CYS F:387 F:368 19.0 0.141 E -123.3 137.6 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 CYS B:387 B:368 20.0 0.148 E -134.7 138.9 20.0 0.148 0.0
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 CYS C:387 C:368 31.0 0.23 E -132.2 132.4 0.0 0.0 0.23 A:P02786:0.23
CYS D:387 D:368 31.0 0.23 E -120.7 136.9 0.0 0.0 0.23 B:P02786:0.23
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 CYS C:387 C:368 30.0 0.222 E -117.7 123.8 1.0 0.007 0.215 A:P02786:0.215
CYS D:387 D:368 28.0 0.207 E -117.7 123.8 2.0 0.015 0.192 B:P02786:0.193
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 CYS C:387 C:368 28.0 0.207 E -123.0 128.2 1.0 0.007 0.2 A:P02786:0.2
CYS D:387 D:368 28.0 0.207 E -122.9 128.2 1.0 0.007 0.2 B:P02786:0.2
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 CYS A:387 A:368 20.0 0.148 E -129.7 140.2 20.0 0.148 0.0
CYS B:387 B:368 18.0 0.133 E -129.0 140.0 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 CYS A:387 A:387 24.0 0.178 E -127.4 136.8 24.0 0.178 0.0
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 CYS A:368 A:368 15.0 0.111 E -116.0 142.0 15.0 0.111 0.0
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 CYS A:368 A:368 20.0 0.148 E -129.5 144.4 20.0 0.148 0.0 HOH
 2.858
 N
 O
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 CYS A:368 A:368 19.0 0.141 E -125.1 127.4 19.0 0.141 0.0 HOH
 4.993
 O
 O
CYS B:368 B:368 19.0 0.141 E -124.7 127.6 NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 CYS A:368 A:368 19.0 0.141 E -124.9 139.2 19.0 0.141 0.0
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 CYS A:368 A:368 19.0 0.141 E -135.2 124.7 19.0 0.141 0.0 HOH
 9.599
 SG
 O
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 CYS A:368 A:368 16.0 0.119 E -129.3 135.2 16.0 0.119 0.0
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 CYS A:368 A:368 21.0 0.156 E -126.5 138.5 21.0 0.156 0.0 HOH
 9.405
 SG
 O
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 CYS A:368 A:368 21.0 0.156 E -130.9 129.4 21.0 0.156 0.0
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 CYS A:368 A:368 19.0 0.141 E -128.3 130.5 19.0 0.141 0.0
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 CYS A:368 A:368 21.0 0.156 E -122.2 137.6 21.0 0.156 0.0 HOH
 7.595
 O
 O
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 CYS B:368 B:368 23.0 0.17 E -124.0 135.4 23.0 0.17 0.0 HOH
 2.997
 N
 O
CYS D:368 D:368 23.0 0.17 E -121.3 134.4 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 CYS C:366 C:368 23.0 0.17 E -122.9 156.1 2.0 0.015 0.155 B:Q8WPU2:0.156
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 CYS C:366 C:368 22.0 0.163 E -123.9 160.0 2.0 0.015 0.148 B:Q8WPU2:0.148
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 CYS A:365 A:368 17.0 0.126 E -120.3 150.3 17.0 0.126 0.0
CYS B:365 B:368 19.0 0.141 E -140.8 155.2 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 CYS C:382 C:368 41.0 0.304 E -128.6 126.6 3.0 0.022 0.282 A:P02786:0.281
CYS D:382 D:368 34.0 0.252 E -118.9 120.6 NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 CYS C:382 C:368 37.0 0.274 E -117.5 134.5 1.0 0.007 0.267 A:P02786:0.267
CYS D:382 D:368 33.0 0.244 E -111.5 124.3 NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 CYS C:382 C:368 32.0 0.237 E -134.7 130.9 2.0 0.015 0.222 A:P02786:0.222
CYS D:382 D:368 34.0 0.252 E -128.5 135.8 NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 CYS A:365 A:368 17.0 0.126 E -117.9 148.2 17.0 0.126 0.0
CYS B:365 B:368 17.0 0.126 E -131.0 144.2 NA NA NA
3v89 2 P02787 100.0 0.0 X-RAY
 2012-02-15 CYS B:32 B:368 11.0 0.081 E -123.8 150.3 11.0 0.081 0.0
3skp 1 P02787 100.0 0.0 X-RAY
 2012-02-15 CYS A:31 A:368 21.0 0.156 E -121.0 142.1 21.0 0.156 0.0 SO4
HOH
 8.499
2.594
 CB
O
 O3
O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 CYS A:387 A:387 17.0 0.126 E -111.7 135.5