Variant

Genome Chromosome Position VCF ID Ref Alt mRNA Change mRNA Info
GRCh37 chr3 133478162 . G A CCDS3080.1:NM_001063.3:c.1192Gcc>Acc_NP_001054.1:p.398A>T Homo sapiens transferrin (TF), mRNA.
pdb_id: 
label_asym_id: 
label_seq_id: 
label_comp_id: 
auth_asym_id: 
auth_seq_id: 
alphafold_id: 
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PDB

Entity Residue Monomer BioUnit Ligand View
PDB Entity Uniprot Identity Evalue ExpMethod Date Name Label Auth ASA rASA SS φ ψ ASA rASA ΔASA Interaction Name Distance Atom(p) Atom(l)
3v83 1 P02787 100.0 0.0 X-RAY
 2012-02-15 ALA A:398 A:379 3.0 0.026 H -54.1 -37.0 3.0 0.026 0.0 HOH
 2.760
 O
 O
ALA B:398 B:379 2.0 0.017 H -65.9 -36.2 NA NA NA
ALA C:398 C:379 4.0 0.035 H -53.9 -33.6 NA NA NA
ALA D:398 D:379 4.0 0.035 H -59.5 -41.6 NA NA NA
ALA E:398 E:379 5.0 0.043 H -60.7 -34.4 NA NA NA
ALA F:398 F:379 2.0 0.017 H -62.0 -36.8 NA NA NA
3v8x 2 P02787 100.0 0.0 X-RAY
 2012-02-29 ALA B:398 B:379 2.0 0.017 H -61.7 -33.0 2.0 0.017 0.0 HOH
 4.604
 O
 O
6d03 2 P02787 100.0 0.0 EM
 2018-06-20 ALA C:398 C:379 2.0 0.017 H -65.0 -32.7 2.0 0.017 0.0
ALA D:398 D:379 2.0 0.017 H -63.9 -35.0 2.0 0.017 0.0
6d04 2 P02787 100.0 0.0 EM
 2018-06-20 ALA C:398 C:379 1.0 0.009 H -65.1 -31.2 1.0 0.009 0.0
ALA D:398 D:379 1.0 0.009 H -65.1 -31.3 1.0 0.009 0.0
6d05 2 P02787 100.0 0.0 EM
 2018-06-20 ALA C:398 C:379 7.0 0.061 H -63.0 -35.2 7.0 0.061 0.0
ALA D:398 D:379 7.0 0.061 H -62.9 -35.3 7.0 0.061 0.0
5dyh 1 P02787 99.86 0.0 X-RAY
 2016-04-27 ALA A:398 A:379 9.0 0.078 H -60.6 -36.6 9.0 0.078 0.0
ALA B:398 B:379 6.0 0.052 H -59.9 -36.6 NA NA NA
6uj6 1 Q06AH7 99.71 0.0 X-RAY
 2020-09-30 ALA A:398 A:398 6.0 0.052 H -57.4 -32.0 6.0 0.052 0.0 HOH
 9.156
 N
 O
3qyt 1 P02787 100.0 0.0 X-RAY
 2012-03-14 ALA A:379 A:379 5.0 0.043 H -61.7 -40.1 5.0 0.043 0.0
4x1b 1 P02787 100.0 0.0 X-RAY
 2015-04-08 ALA A:379 A:379 5.0 0.043 H -58.9 -35.7 5.0 0.043 0.0 HOH
 2.707
 O
 O
4x1d 1 P02787 100.0 0.0 X-RAY
 2015-04-08 ALA A:379 A:379 5.0 0.043 H -60.7 -28.5 5.0 0.043 0.0 HOH
 2.712
 O
 O
ALA B:379 B:379 4.0 0.035 H -60.7 -28.8 NA NA NA
5h52 1 P02787 100.0 0.0 X-RAY
 2017-11-08 ALA A:379 A:379 5.0 0.043 H -61.4 -36.2 5.0 0.043 0.0
5wtd 1 P02787 100.0 0.0 X-RAY
 2017-12-20 ALA A:379 A:379 7.0 0.061 H -61.6 -32.9 7.0 0.061 0.0 HOH
 2.975
 O
 O
6jas 1 P02787 100.0 0.0 X-RAY
 2020-01-29 ALA A:379 A:379 6.0 0.052 H -64.3 -36.0 6.0 0.052 0.0 HOH
 3.963
 O
 O
4h0w 1 P02787 99.85 0.0 X-RAY
 2012-12-26 ALA A:379 A:379 8.0 0.07 H -60.4 -37.0 8.0 0.07 0.0 HOH
 2.664
 O
 O
5x5p 1 P02787 99.85 0.0 X-RAY
 2018-02-21 ALA A:379 A:379 5.0 0.043 H -69.0 -34.2 5.0 0.043 0.0
5y6k 1 P02787 99.85 0.0 X-RAY
 2018-01-24 ALA A:379 A:379 5.0 0.043 H -63.2 -36.7 5.0 0.043 0.0
6ctc 1 P02787 99.85 0.0 X-RAY
 2018-10-24 ALA A:379 A:379 4.0 0.035 H -72.2 -31.5 4.0 0.035 0.0 HOH
 2.806
 O
 O
3ve1 2 P02787 99.71 0.0 X-RAY
 2012-02-22 ALA B:379 B:379 4.0 0.035 H -55.9 -38.9 4.0 0.035 0.0 HOH
 5.523
 CB
 O
ALA D:379 D:379 5.0 0.043 H -58.3 -34.5 NA NA NA
6soy 3 P02787 100.0 0.0 X-RAY
 2019-11-06 ALA C:377 C:379 15.0 0.13 H -65.4 -34.6 15.0 0.13 0.0
6soz 3 P02787 100.0 0.0 X-RAY
 2019-11-06 ALA C:377 C:379 13.0 0.113 H -62.3 -37.5 13.0 0.113 0.0
2hav 1 P02787 100.0 0.0 X-RAY
 2006-06-27 ALA A:376 A:379 6.0 0.052 H -66.6 -38.0 6.0 0.052 0.0
ALA B:376 B:379 5.0 0.043 H -62.0 -37.8 NA NA NA
3s9l 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ALA C:393 C:379 4.0 0.035 H -68.1 -35.9 4.0 0.035 0.0
ALA D:393 D:379 13.0 0.113 H -74.7 -38.6 NA NA NA
3s9m 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ALA C:393 C:379 6.0 0.052 H -73.8 -34.9 6.0 0.052 0.0
ALA D:393 D:379 16.0 0.139 H -77.0 -30.3 NA NA NA
3s9n 2 P02787 99.41 0.0 X-RAY
 2011-08-10 ALA C:393 C:379 7.0 0.061 H -68.4 -32.9 7.0 0.061 0.0
ALA D:393 D:379 33.0 0.287 H -79.6 -23.9 NA NA NA
2hau 1 P02787 99.7 0.0 X-RAY
 2006-06-27 ALA A:376 A:379 5.0 0.043 H -57.3 -43.8 5.0 0.043 0.0
ALA B:376 B:379 8.0 0.07 H -71.7 -32.7 NA NA NA
3v89 2 P02787 100.0 0.0 X-RAY
 2012-02-15 ALA B:43 B:379 29.0 0.252 H -71.7 -51.6 29.0 0.252 0.0
3skp 1 P02787 100.0 0.0 X-RAY
 2012-02-15 ALA A:42 A:379 32.0 0.278 H -59.8 -39.5 32.0 0.278 0.0 HOH
 2.795
 O
 O

AlphaFold DB

Entity Residue Monomer View
ID Entity Uniprot Identity Evalue Name Label Auth ASA rASA SS φ ψ
af-p02787-f1 1 P02787 99.86 0.0 ALA A:398 A:398 7.0 0.061 H -61.7 -38.6