Variant
| Genome | Chromosome | Position | VCF ID | Ref | Alt | mRNA Change | mRNA Info | GRCh37 | chr3 | 133483724 | . | G | A | CCDS3080.1:NM_001063.3:c.1303Gat>Aat_NP_001054.1:p.435D>N | Homo sapiens transferrin (TF), mRNA. |
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PDB
| Entity | Residue | Monomer | BioUnit | Ligand | View | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| PDB | Entity | Uniprot | Identity | Evalue | ExpMethod | Date | Name | Label | Auth | ASA | rASA | SS | φ | ψ | ASA | rASA | ΔASA | Interaction | Name | Distance | Atom(p) | Atom(l) | |
| 3v83 | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2012-02-15 | ASP | A:435 | A:416 | 106.0 | NA | T | -48.2 | -85.4 | 106.0 | NA | NA |
HOH |
2.745 |
O |
O |
||
| ASP | B:435 | B:416 | 95.0 | NA | T | -60.8 | 146.4 | NA | NA | NA | |||||||||||||
| ASP | C:435 | C:416 | 92.0 | NA | S | -77.4 | 151.9 | NA | NA | NA | |||||||||||||
| ASP | D:435 | D:416 | 94.0 | NA | T | -73.9 | 141.5 | NA | NA | NA | |||||||||||||
| ASP | E:435 | E:416 | 102.0 | NA | T | -67.7 | -47.8 | NA | NA | NA | |||||||||||||
| ASP | F:435 | F:416 | 87.0 | NA | S | -60.1 | 115.4 | NA | NA | NA | |||||||||||||
| 3v8x | 2 | P02787 | 100.0 | 0.0 |
X-RAY |
2012-02-29 | ASP | B:435 | B:416 | 164.0 | 1.0 | T | -61.0 | -32.0 | 5.0 | 0.033 | 0.967 |
A:Q9K0U9:1.0 |
NAG HOH |
8.129 4.824 |
N CA |
O7 O |
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| 6d03 | 2 | P02787 | 100.0 | 0.0 |
EM |
2018-06-20 | ASP | C:435 | C:416 | 155.0 | 1.0 | S | -80.9 | -10.9 | 155.0 | 1.0 | 0.0 |
NAG NAG NAG |
5.441 6.361 6.629 |
OD1 OD1 O |
O6 O3 C8 |
||
| ASP | D:435 | D:416 | 163.0 | 1.0 | S | -70.4 | -29.1 | 163.0 | 1.0 | 0.0 |
NAG NAG NAG |
5.580 4.858 6.114 |
OD1 OD1 O |
O6 O7 C8 |
|||||||||
| 6d04 | 2 | P02787 | 100.0 | 0.0 |
EM |
2018-06-20 | ASP | C:435 | C:416 | 163.0 | 1.0 | S | -68.9 | -31.8 | 163.0 | 1.0 | 0.0 |
NAG NAG NAG |
5.540 5.684 5.649 |
N OD1 O |
O6 C8 C8 |
||
| ASP | D:435 | D:416 | 162.0 | 1.0 | S | -68.9 | -31.8 | 162.0 | 1.0 | 0.0 |
NAG NAG NAG |
5.568 5.118 5.431 |
N OD1 O |
O6 O7 C8 |
|||||||||
| 6d05 | 2 | P02787 | 100.0 | 0.0 |
EM |
2018-06-20 | ASP | C:435 | C:416 | 158.0 | 1.0 | T | -72.0 | -27.1 | 158.0 | 1.0 | 0.0 |
NAG NAG NAG |
5.081 5.039 6.470 |
N OD1 O |
O6 O7 C8 |
||
| ASP | D:435 | D:416 | 158.0 | 1.0 | T | -72.0 | -27.0 | 158.0 | 1.0 | 0.0 |
NAG NAG NAG |
5.301 7.302 7.585 |
N OD1 O |
O6 O7 O7 |
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| 5dyh | 1 | P02787 | 99.86 | 0.0 |
X-RAY |
2016-04-27 | ASP | A:435 | A:416 | 173.0 | 1.0 | S | -74.7 | -39.1 | 173.0 | 1.0 | 0.0 | ||||||
| ASP | B:435 | B:416 | 107.0 | NA | S | -73.3 | -40.0 | NA | NA | NA | |||||||||||||
| 6uj6 | 1 | Q06AH7 | 99.71 | 0.0 |
X-RAY |
2020-09-30 | ASP | A:435 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 3qyt | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2012-03-14 | ASP | A:416 | A:416 | 170.0 | 1.0 | T | -62.6 | -9.5 | 170.0 | 1.0 | 0.0 |
NAG NAG |
7.351 6.851 |
OD1 O |
C6 O6 |
||
| 4x1b | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2015-04-08 | ASP | A:416 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 4x1d | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2015-04-08 | ASP | A:416 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| ASP | B:416 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | |||||||||||||
| 5h52 | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2017-11-08 | ASP | A:416 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 5wtd | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2017-12-20 | ASP | A:416 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 6jas | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2020-01-29 | ASP | A:416 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 4h0w | 1 | P02787 | 99.85 | 0.0 |
X-RAY |
2012-12-26 | ASP | A:416 | A:416 | 172.0 | 1.0 | T | -67.2 | -13.2 | 172.0 | 1.0 | 0.0 |
NAG HOH |
6.592 4.630 |
N O |
C8 O |
||
| 5x5p | 1 | P02787 | 99.85 | 0.0 |
X-RAY |
2018-02-21 | ASP | A:416 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 5y6k | 1 | P02787 | 99.85 | 0.0 |
X-RAY |
2018-01-24 | ASP | A:416 | NA:NA | DO | NA | DO | DO | DO | NA | NA | NA | ||||||
| 6ctc | 1 | P02787 | 99.85 | 0.0 |
X-RAY |
2018-10-24 | ASP | A:416 | A:416 | 119.0 | NA | T | -66.6 | -13.8 | 119.0 | NA | NA | ||||||
| 3ve1 | 2 | P02787 | 99.71 | 0.0 |
X-RAY |
2012-02-22 | ASP | B:416 | B:416 | 168.0 | 1.0 | S | -97.7 | -1.4 | 168.0 | 1.0 | 0.0 |
HOH |
4.257 |
O |
O |
||
| ASP | D:416 | D:416 | 172.0 | 1.0 | S | -97.5 | -2.9 | NA | NA | NA | |||||||||||||
| 6soy | 3 | P02787 | 100.0 | 0.0 |
X-RAY |
2019-11-06 | ASP | C:414 | C:416 | 174.0 | 1.0 | S | -69.2 | -62.0 | 174.0 | 1.0 | 0.0 |
NAG |
5.869 |
OD1 |
C8 |
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| 6soz | 3 | P02787 | 100.0 | 0.0 |
X-RAY |
2019-11-06 | ASP | C:414 | C:416 | 176.0 | 1.0 | T | -65.8 | -62.6 | 176.0 | 1.0 | 0.0 | ||||||
| 2hav | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2006-06-27 | ASP | A:413 | A:416 | 158.0 | 1.0 | T | -94.9 | 10.4 | 158.0 | 1.0 | 0.0 | ||||||
| ASP | B:413 | B:416 | 148.0 | 0.987 | S | 6.8 | 72.8 | NA | NA | NA | |||||||||||||
| 3s9l | 2 | P02787 | 99.41 | 0.0 |
X-RAY |
2011-08-10 | ASP | C:430 | C:416 | 104.0 | NA | S | -61.1 | -45.3 | 104.0 | NA | NA | ||||||
| ASP | D:430 | D:416 | 182.0 | 1.0 | S | -66.0 | -40.1 | NA | NA | NA | |||||||||||||
| 3s9m | 2 | P02787 | 99.41 | 0.0 |
X-RAY |
2011-08-10 | ASP | C:430 | C:416 | 116.0 | NA | S | -70.7 | -44.7 | 116.0 | NA | NA | ||||||
| ASP | D:430 | D:416 | 169.0 | 1.0 | S | -66.3 | -38.0 | NA | NA | NA | |||||||||||||
| 3s9n | 2 | P02787 | 99.41 | 0.0 |
X-RAY |
2011-08-10 | ASP | C:430 | C:416 | 103.0 | NA | S | -68.8 | -50.5 | 103.0 | NA | NA | ||||||
| ASP | D:430 | D:416 | 166.0 | 1.0 | S | -68.4 | -46.8 | NA | NA | NA | |||||||||||||
| 2hau | 1 | P02787 | 99.7 | 0.0 |
X-RAY |
2006-06-27 | ASP | A:413 | A:416 | 169.0 | 1.0 | T | -85.5 | 18.1 | 169.0 | 1.0 | 0.0 | ||||||
| ASP | B:413 | B:416 | 161.0 | 1.0 | T | -60.6 | -77.6 | NA | NA | NA | |||||||||||||
| 3v89 | 2 | P02787 | 100.0 | 0.0 |
X-RAY |
2012-02-15 | ASP | B:80 | B:416 | 171.0 | 1.0 | S | -76.1 | -36.0 | 6.0 | 0.04 | 0.96 |
A:Q9JPJ0:1.0 |
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| 3skp | 1 | P02787 | 100.0 | 0.0 |
X-RAY |
2012-02-15 | ASP | A:79 | A:416 | 168.0 | 1.0 | T | -80.3 | -15.0 | 168.0 | 1.0 | 0.0 |
HOH |
3.400 |
O |
O |
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AlphaFold DB
| Entity | Residue | Monomer | View | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Entity | Uniprot | Identity | Evalue | Name | Label | Auth | ASA | rASA | SS | φ | ψ | |
| af-p02787-f1 | 1 | P02787 | 99.86 | 0.0 | ASP | A:435 | A:435 | 182.0 | 1.0 | T | -62.0 | -26.4 | |